Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., rarD protein from Pseudomonas stutzeri RCH2

 Score =  140 bits (354), Expect = 3e-38
 Identities = 94/291 (32%), Positives = 157/291 (53%), Gaps = 7/291 (2%)

Query: 13  GILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRW---RSVVG 69
           G+  +++A T++     Y   L  +S  +I   R++ +   LA+L+    RW   R ++ 
Sbjct: 9   GVAGSLAASTLFATLYYYTSLLEPLSGQQIYGWRILLTAPCLALLLLAIGRWGEVREILL 68

Query: 70  VVHTPRKFWLLL-VTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGER 128
            V    + WL L +++ LVG    +F+W+    H LD SLGY++ PL  VL G L  GE 
Sbjct: 69  RVPVEPRLWLALPLSSALVGLQLWLFMWAPINGHGLDVSLGYFLLPLTLVLTGRLVFGEA 128

Query: 129 LRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETL 188
           + +LQ  A  LAA+GVG QL++  S+    +A+A  +  Y +LR+ I   +  GL+++ +
Sbjct: 129 ISRLQRLACLLAAVGVGNQLLLASSLSWPVLAVALGYPCYFVLRRWIGTASLGGLWVDLI 188

Query: 189 FMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLGF 248
             LP AA++    +D  T      +  L LL++  G ++ L L     A+  L L+  G 
Sbjct: 189 ISLPVAALFA--FSDRETLQQLAASPALLLLIIGLGALSALALALMIVASKHLDLALFGL 246

Query: 249 FQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAAR 299
             Y+ P L+  +A+L+ GE+  SD+ +T+  IW+A+ +  V+G KA  AAR
Sbjct: 247 LSYVEPVLLVAVALLL-GESIASDQWLTYVAIWTAIALLIVEGAKALRAAR 296