Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., RarD protein from Pseudomonas syringae pv. syringae B728a

 Score =  265 bits (676), Expect = 1e-75
 Identities = 138/286 (48%), Positives = 193/286 (67%), Gaps = 12/286 (4%)

Query: 11  KKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRR---WRSV 67
           ++G +L +SAY +WG+ PIYFKA+ AV A+EI+ HR +WS +  ++++   +    WR +
Sbjct: 7   RRGYILGLSAYIIWGLFPIYFKAIAAVPAIEIIIHRALWSALFGSIVLMFWKHPGWWRDL 66

Query: 68  VGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGE 127
               + P++  +L ++  L+  NW+I++W++N   ML+ASLGYYINPL+NVLLGML LGE
Sbjct: 67  R---NNPQRLAVLALSGTLIASNWIIYVWAVNNGRMLEASLGYYINPLVNVLLGMLLLGE 123

Query: 128 RLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLET 187
           RLR+LQ  AVA AAIGV  Q+   GS+P V++AL  +F FYGL+RK+  V A  GL +ET
Sbjct: 124 RLRRLQMLAVAFAAIGVAHQVWHVGSLPWVSLALPLTFAFYGLIRKQAPVAALPGLVVET 183

Query: 188 LFMLPAAAIYLIWLADTPTS-DMALNTWQLN--LLLVCAGVVTTLPLLCFTGAAARLKLS 244
             ++P A   LIWLA  PT+  +    W     + L  AG VT +PL+CF  AA  L  +
Sbjct: 184 WMLVPLA---LIWLAINPTAVSVQPEFWTTTQAIWLAAAGPVTLVPLVCFNAAARHLPFT 240

Query: 245 TLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVD 290
           TLGF QY+ P+L+ LLAVL+YGE  T+   ITFAFIW+ L I+SVD
Sbjct: 241 TLGFLQYVAPTLVLLLAVLLYGEHLTTSTLITFAFIWAGLAIYSVD 286