Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., RarD protein from Pseudomonas syringae pv. syringae B728a

 Score =  129 bits (323), Expect = 1e-34
 Identities = 86/293 (29%), Positives = 147/293 (50%), Gaps = 9/293 (3%)

Query: 12  KGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRSV---- 67
           KG++L++ A T++G+   Y   +  +   EI   R++ +     + + +   W+ V    
Sbjct: 3   KGVVLSVLASTLFGVMYFYTSLMTPLDGEEIFGWRMLLTVPCATLFMLVSGDWQRVREVA 62

Query: 68  VGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGE 127
           V +   P   + LL++++L+G   LIF+W+      L+ SLGY++ PL  +L G +  GE
Sbjct: 63  VRLRQQPLLIFALLLSSVLLGAQLLIFMWAPLHGRSLEVSLGYFLLPLSMILTGRVVYGE 122

Query: 128 RLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLET 187
            L  LQ  A   A IGVG +L   GS     + +A  +  Y +LR+K++ D   GL+ + 
Sbjct: 123 HLSYLQKVAAVFAMIGVGHELWRLGSFSWETLLVAGGYPLYFVLRRKLKTDHLGGLWFDM 182

Query: 188 LFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLG 247
           L MLP      +W               L LL+   GV++   L+ +  A+  L  S  G
Sbjct: 183 LLMLPIG----LWFIAHGHPQAIQQAPLLYLLIPLLGVISASALVSYILASRLLPFSLFG 238

Query: 248 FFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAARR 300
              Y+ P L+  +A+L+ GE+ + D+ +T+  IW A+V+  ++G K   A RR
Sbjct: 239 LLSYVEPILLVGVALLL-GESISRDEWLTYLPIWLAVVVLMIEGAKHMLAQRR 290