Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., rarD protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  359 bits (922), Expect = e-104
 Identities = 172/283 (60%), Positives = 222/283 (78%)

Query: 11  KKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRSVVGV 70
           +KGILLAI AYTMWG AP+YFK L  +SA +IL HRV+WSFV  A+L+     +  +  +
Sbjct: 8   RKGILLAIGAYTMWGFAPLYFKLLEQISATDILLHRVIWSFVFTALLMVFIGGFGKLRQL 67

Query: 71  VHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGERLR 130
           +  P++  +LLVT++L+ GNWL+FIW++N +HMLDASLGYYINPLLNVLLGM+FLGERLR
Sbjct: 68  LKAPKQLLVLLVTSVLIAGNWLLFIWAVNNDHMLDASLGYYINPLLNVLLGMVFLGERLR 127

Query: 131 KLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETLFM 190
            LQWFAV LA +GV +Q++ FGS+P+V++ALA SFG YGLLRKK++VDA+TGL +ET  +
Sbjct: 128 PLQWFAVFLATVGVTVQVISFGSIPVVSLALAGSFGIYGLLRKKVKVDAKTGLLVETAIL 187

Query: 191 LPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLGFFQ 250
           +P A  YL+    +    M  N WQLNLLLV AG+VTT PLLCF GAA R+ LS LGFFQ
Sbjct: 188 MPVALGYLVLTLGSAEHSMLSNDWQLNLLLVAAGIVTTAPLLCFAGAAVRIPLSMLGFFQ 247

Query: 251 YIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLK 293
           YIGPS+MF+LAV +YGE F  +K+ITF FIW+AL +F++D L+
Sbjct: 248 YIGPSIMFILAVSLYGEPFGVEKSITFGFIWTALAVFTLDMLR 290