Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., RarD protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  223 bits (569), Expect = 3e-63
 Identities = 116/278 (41%), Positives = 171/278 (61%), Gaps = 3/278 (1%)

Query: 12  KGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRSVVGVV 71
           +G+  A+ AY +WGI+P++FKA+  VSALEILSHRV+W+ V++ + + L     + +  +
Sbjct: 20  RGVAAALGAYGVWGISPLFFKAVSEVSALEILSHRVLWAMVVMGITLGLRGELAASLRFL 79

Query: 72  HTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGERLRK 131
              R F L+L   + +  NWL FI +  + H +  SLGYYI PL+ V+LG L LGE + +
Sbjct: 80  ANRRVFLLMLAATVAISINWLTFIHAATSGHAMQGSLGYYIFPLVTVVLGRLVLGEEMSR 139

Query: 132 LQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETLFML 191
            Q  AVALAA GVGI L   GS+P +++ LA++F  YGL+RK + V    GLF+E L + 
Sbjct: 140 RQGLAVALAAAGVGIALWRTGSLPWISLTLASTFALYGLIRKTVSVPPLAGLFIEALLLS 199

Query: 192 PAAAIYLIWLADTPTSDMAL--NTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLGFF 249
           P     L W+ +     +A     W  +L L+  G +T +PL  FT AA RL+LSTLG  
Sbjct: 200 PVLIGLLAWI-ELKGGGLAFFDGPWGRSLWLMALGPLTAVPLFFFTWAARRLRLSTLGVI 258

Query: 250 QYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIF 287
           QY  P++ F LA LV+ E  T+ + +TF FIW+ + ++
Sbjct: 259 QYTNPTIQFALAALVFKEPVTTTELLTFGFIWAGVALY 296