Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., EamA family transporter RarD from Rahnella sp. WP5

 Score =  362 bits (930), Expect = e-105
 Identities = 177/297 (59%), Positives = 225/297 (75%)

Query: 6   DQQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWR 65
           D    ++G++ A  AY +WGIAP YFK +  V A EIL+HRV+WSF  + VL+ + R W 
Sbjct: 2   DAHRTRQGVIFAFIAYLIWGIAPAYFKLIKQVPADEILTHRVIWSFFFMLVLLSVSRSWG 61

Query: 66  SVVGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFL 125
            V  V+  P+K  +LL+TALLVGGNWLIFIW+IN NH+L+ASLGY+INPL+NV+LGMLFL
Sbjct: 62  DVRRVLAQPKKIGMLLITALLVGGNWLIFIWAINHNHILEASLGYFINPLVNVVLGMLFL 121

Query: 126 GERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFL 185
            ER R LQWFAVALA  GV +Q+ VFGSVP++AI L+ +F FYGLLRKKI VD+QTG+ +
Sbjct: 122 RERFRSLQWFAVALAFAGVLVQVWVFGSVPVIAIGLSLTFAFYGLLRKKIGVDSQTGMLI 181

Query: 186 ETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLST 245
           ETL++LP A IYL ++A + TS++A N W L+LLL+ AG++TT+PLL FT AAARLKLST
Sbjct: 182 ETLWLLPVAGIYLFFIAHSQTSNLAANPWSLDLLLMAAGIITTIPLLFFTAAAARLKLST 241

Query: 246 LGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAARRAR 302
           LGFFQY+GP+LMFLLAV+ YGE   + + ITF FIW  L+ F  D L      RR R
Sbjct: 242 LGFFQYLGPTLMFLLAVVFYGETVNTSQLITFGFIWVGLLCFIGDALYTQGRLRRGR 298