Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., EamA family transporter RarD from Pseudomonas aeruginosa PA14

 Score =  269 bits (687), Expect = 7e-77
 Identities = 134/287 (46%), Positives = 192/287 (66%), Gaps = 6/287 (2%)

Query: 11  KKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRR---WRSV 67
           ++G +L ++AY +WG+ P+YFK L  + A+EI+  R VWS +  AVL+   +    WR +
Sbjct: 7   RRGYVLGLTAYVIWGLFPLYFKLLERIPAVEIIVQRAVWSALFGAVLLLFWKHPGWWREL 66

Query: 68  VGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGE 127
                 P++F +L  + LL+  NW+ ++W++N  HML+ASLGYYINPL+NV+LGML L E
Sbjct: 67  R---QNPQRFVVLAASGLLIASNWMTYVWAVNNGHMLEASLGYYINPLINVMLGMLLLKE 123

Query: 128 RLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLET 187
           RLR LQW AVALA++GV  Q+   GS+P V++ LA +FGFYGL+RKK  V A  GL +ET
Sbjct: 124 RLRPLQWLAVALASLGVAQQVWQLGSLPWVSLVLALTFGFYGLIRKKAPVAALPGLVVET 183

Query: 188 LFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLG 247
             +LP A ++L+  AD PTS+ A  +    L +V AG VT +PL+CF  AA  L  +TLG
Sbjct: 184 WLLLPLALVWLLLFADGPTSETAFWSTPEALWVVAAGPVTLVPLVCFNAAARHLPYATLG 243

Query: 248 FFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKA 294
           F QY+ P+L+ L A+L++GE   S +   FAFIW AL ++S D  ++
Sbjct: 244 FLQYLAPTLVLLQAILLFGEHLDSSRLTAFAFIWLALAVYSFDAWRS 290