Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., transporter DMT superfamily protein (RefSeq) from Shewanella loihica PV-4

 Score =  340 bits (872), Expect = 2e-98
 Identities = 162/280 (57%), Positives = 216/280 (77%), Gaps = 2/280 (0%)

Query: 11  KKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRSVVGV 70
           +KG+ LAI AY +WG AP+YFK L  VSA EIL HRV+WSFV + +L+     +  +  +
Sbjct: 7   RKGVALAICAYCLWGFAPLYFKLLNHVSATEILLHRVIWSFVFMLILMQFIGGFAKLRAL 66

Query: 71  VHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGERLR 130
              P++  +L +T++L+ GNWL+FIW+IN +HMLDASLGY+INPL+NVLLGM+FL ERLR
Sbjct: 67  FRQPKQLGVLALTSVLIAGNWLLFIWAINNDHMLDASLGYFINPLINVLLGMVFLQERLR 126

Query: 131 KLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETLFM 190
           KLQW AV+LA  GV IQL+ FGS+P+V++ LA SFG YGLLRKK+ +DA+TGL +ET  +
Sbjct: 127 KLQWAAVSLACAGVLIQLISFGSIPVVSLGLAASFGVYGLLRKKVNIDAKTGLLVETAIL 186

Query: 191 LPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLGFFQ 250
           +P A +YL    D   + +  N+WQ+NLLL+ AG+VT++PLLCF GAA R+ LS LGFFQ
Sbjct: 187 VPVALLYLAMNLD--DTSILENSWQMNLLLMAAGIVTSIPLLCFAGAATRIPLSMLGFFQ 244

Query: 251 YIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVD 290
           YIGPS+MF++AV ++ E F  +K ITFAFIWSALVIF++D
Sbjct: 245 YIGPSIMFIMAVSLFNEPFDLEKGITFAFIWSALVIFTLD 284