Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., rarD protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  361 bits (926), Expect = e-104
 Identities = 171/280 (61%), Positives = 223/280 (79%)

Query: 11  KKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRSVVGV 70
           +KGILLA+SAY MWG AP+YFK L  VSA EIL HRV+WSFV + +++     +  +  +
Sbjct: 7   RKGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMMFIGGFGKLRQL 66

Query: 71  VHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGERLR 130
              P++  +L +T+LL+ GNWL+FIW++N +HMLDASLGY+INPLLNVLLGMLFLGERLR
Sbjct: 67  FKQPKQLIVLTITSLLIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLGERLR 126

Query: 131 KLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETLFM 190
           KLQWFAVALA+ GV IQL+ FGS+PIV++ALA +FG Y LLRKK+ VDA++GL +ET  +
Sbjct: 127 KLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGLYALLRKKVNVDAKSGLLVETAIL 186

Query: 191 LPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLGFFQ 250
           LP A +YL+   D+ T++M  N W LNLLL+ AG+VTT+PLLCF GAA R+ LS LGFFQ
Sbjct: 187 LPVALVYLVATLDSATANMLTNDWHLNLLLMAAGIVTTIPLLCFAGAAVRIPLSMLGFFQ 246

Query: 251 YIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVD 290
           YIGPS+MF+LAV ++ E F ++K+ITF FIWSAL++F+ D
Sbjct: 247 YIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFD 286