Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., chloramphenicol resistance permease RarD from Klebsiella michiganensis M5al

 Score =  381 bits (979), Expect = e-111
 Identities = 185/296 (62%), Positives = 231/296 (78%)

Query: 6   DQQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWR 65
           D +  + G+LLA++AY +WGIAP YFK +  V A EIL+HRV+WSF  +  LI + R+W 
Sbjct: 2   DAKQTRVGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVALISVSRQWP 61

Query: 66  SVVGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFL 125
            V  ++ TP+K  LL ++A+LVGGNWL+FIW++N +HML+ASLGY+INPL+N+LLGM+FL
Sbjct: 62  QVKRLLKTPKKVLLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121

Query: 126 GERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFL 185
           GER R++QW AV LAA GV +QL  FGS+PI+A+ LA SF FYGLLRKKI VDAQTG+  
Sbjct: 122 GERFRRMQWLAVLLAACGVLVQLWTFGSLPIIALGLAFSFAFYGLLRKKIAVDAQTGMLF 181

Query: 186 ETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLST 245
           ETL++LP AAIYL  +AD+PTS M  N W LNLLL+ AGVVTT+PLLCFTGAA RL+LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGQNPWSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241

Query: 246 LGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAARRA 301
           LGFFQYIGP+LMFLLAV  YGE   +DK +TFAFIW AL IF +D +      RRA
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTIRRTRRA 297