Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., rarD protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  234 bits (596), Expect = 2e-66
 Identities = 124/303 (40%), Positives = 181/303 (59%), Gaps = 20/303 (6%)

Query: 3   MTPDQQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGR 62
           MT D   ++KG++  + A+ +WG+ P+Y+K L  V   EIL HR++WSFV L  ++    
Sbjct: 1   MTSDT--SRKGLVAGLGAFALWGLLPLYWKQLLDVPPFEILCHRILWSFVFLLPVVVFSG 58

Query: 63  RWRSVVGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGM 122
           RW  V   V        +  + LLVG NW ++IW++N  H+L+ SLGYYINPL+NV LG 
Sbjct: 59  RWAEVRAAVRDRGTLLRVACSGLLVGFNWYLYIWAVNTGHVLETSLGYYINPLMNVALGC 118

Query: 123 LFLGERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTG 182
           +FL ER  +LQ  A+ALAA GV   L  +G  P VA+ LA SF  YG +RK ++V +  G
Sbjct: 119 VFLRERPSRLQVAAIALAAFGVLWMLAGYGRFPWVALTLAGSFSLYGFMRKTVKVASVPG 178

Query: 183 LFLETLFMLPAAAIYLI---------WLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLC 233
           LF+ET  + P  A++L+         ++   PT+D         LLL+ AGV T+ PL+ 
Sbjct: 179 LFIETSILAPFVAVWLVRLHLGGGGAFMHLAPTTD---------LLLMGAGVATSTPLIW 229

Query: 234 FTGAAARLKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLK 293
           F  AA  L+L+T+G  QY+ P+L F+L V V+ E  T    +TF  IW AL +++++G +
Sbjct: 230 FAFAARSLRLTTVGVLQYLAPTLAFMLGVFVFHEPLTPSHLVTFGCIWGALALYTIEGWR 289

Query: 294 AGH 296
           A H
Sbjct: 290 ALH 292