Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 189 a.a., L-rhamnose operon transcriptional activator RhaR from Pseudomonas fluorescens FW300-N2E2

 Score = 82.0 bits (201), Expect = 8e-21
 Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 4/177 (2%)

Query: 89  IEPEWLQQTLEANQI--EQVIGFEQLIVQDPTLFHSLQQLHHLLRQDNLSQLAKDCLPYQ 146
           I+PEW+ + +   +   + +  F+  + Q P    +    H ++ +   S L ++ +   
Sbjct: 7   IDPEWVNRMVFQGRFTDDHIHLFQTALSQAPDFARTFLHQHQIIEKSP-SSLERETILLD 65

Query: 147 GFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQLDQPIRLEQLAQLCQLSPTQFQRHF 206
               L ER     +P V    QH +  +K  +  + D+ + LE+LAQL  L P    R F
Sbjct: 66  LVTQLFERSGAPIEP-VSAAEQHAVQKIKRKLEDEFDKHLSLEELAQLVNLDPLYLIRVF 124

Query: 207 KAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAHFSKAFKATYGLSP 263
           K   G++P+++  + R+ Q  KLL++G    + ++  GF+DQ+H ++AFK   G++P
Sbjct: 125 KKSVGVSPHSYQIQKRIAQVQKLLRTGSSLAEASFTCGFFDQSHMTRAFKKVVGITP 181