Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  110 bits (275), Expect = 3e-29
 Identities = 75/256 (29%), Positives = 123/256 (48%), Gaps = 11/256 (4%)

Query: 16  AISLIEA----DYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDEL 71
           A+  IEA    D R+  + RH H    IG IT G   + H+ +  QV  G VVLM+P ++
Sbjct: 17  ALPFIEARAIGDGRKVCYSRHSHDHFSIGAITAGRSTYLHERSKFQVKSGTVVLMNPGDV 76

Query: 72  HDGHAHSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIV---QDPTLFHSLQQLHH 128
           H  +   +  +   +  ++ +WL+        ++ + F+       +D  LF +L++L+ 
Sbjct: 77  HACNPIDDQPWSYVMLYVDTQWLRDLQRRVGFDESLDFQGFATTHSRDVELFTALEKLYG 136

Query: 129 LLRQDNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQH-NLALLKEWVLSQLDQPIR 187
            L  + L    K       F  L +R +   +P     G H +L    +++     + ++
Sbjct: 137 QLVDEQLDAGDKHAAAEAFFIDLQQRLNPASRPD---RGSHPSLMRAAQFIHDHCSEALK 193

Query: 188 LEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYD 247
           LE +    QLSP+   R FK   G+TP+A+L   R++ A + L+ GK   DVA   GF D
Sbjct: 194 LEDICTAAQLSPSYLSRAFKRHYGMTPHAFLVNRRIQFARRQLREGKLIADVALDSGFAD 253

Query: 248 QAHFSKAFKATYGLSP 263
           QAHF +AFK     +P
Sbjct: 254 QAHFQRAFKQHLAATP 269