Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score = 83.6 bits (205), Expect = 4e-21
 Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 7/255 (2%)

Query: 17  ISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDGHA 76
           + ++EAD  +  F RH H    IGL+ +G QR        +   G ++ ++P E+HDG  
Sbjct: 16  VEIVEADSDR-TFVRHMHEHFGIGLLVRGAQRSASGRGQVEAMAGDLISVNPAEVHDGAP 74

Query: 77  HSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQL---IVQDPTLFHSLQQLHHLLRQD 133
             N   + Q+   +P  + Q  +  + +  I  ++    ++Q P      + L+  L Q 
Sbjct: 75  IGNGTRRWQMLYFDPLLIAQAFKDMENDGGICAQEFAYPVLQSPHAAELFRTLYQTLAQ- 133

Query: 134 NLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQLDQPIRLEQLAQ 193
              +        +    LLE       P +  L +      K  +       + L  LA+
Sbjct: 134 -AEEFGAHLKIEETLVLLLEHLLDRSMP-ISCLPKVAANRAKALIDDDPQSSMSLALLAR 191

Query: 194 LCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAHFSK 253
              LS  Q  R F   TGLTP+A+L + R+ +A +L+ +G P  D +   GF DQ+H ++
Sbjct: 192 EADLSRFQLVRAFTRLTGLTPHAYLMQRRIHRARQLIAAGMPLADASLASGFADQSHMTR 251

Query: 254 AFKATYGLSPSLITR 268
            F  ++G SP +  R
Sbjct: 252 CFVRSFGFSPGMYAR 266