Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  102 bits (253), Expect = 1e-26
 Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 24/257 (9%)

Query: 17  ISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDGHA 76
           +  IEA +    ++ H H    IG    GVQ F+++GA      G  +++ PDELHDG A
Sbjct: 22  VERIEAWFGGHGYDPHRHDTYSIGRTLSGVQSFHYKGALRHGLPGNTLILHPDELHDGMA 81

Query: 77  HSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIVQDPTLFHS----LQQLHHLLRQ 132
            +  G++ ++  ++P  +QQ L    +  ++G    +  DP L+ +    +Q + H L  
Sbjct: 82  GTEAGFRYRMAYVDPALIQQVLGGEPLPYIVGG---LSNDPRLYQASESFVQAMDHPL-- 136

Query: 133 DNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNL-----ALLKEWVLSQLDQPIR 187
                   D L  Q    L +  + L+    KP G+  L        +E++++ L   I 
Sbjct: 137 --------DALEEQD--ALFDLATALRAVAGKPRGRKRLDYRATERAREFIMAHLHLSIT 186

Query: 188 LEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYD 247
           LE L  +         R F+   G +PY ++   RL+Q   L+  G    D A   GF+D
Sbjct: 187 LEMLEHISGRERWSLSRDFRVLYGTSPYRFVTLRRLDQFRALILDGFTLVDAALAAGFHD 246

Query: 248 QAHFSKAFKATYGLSPS 264
           Q+H ++ F   YG+ PS
Sbjct: 247 QSHMTRHFTRCYGVPPS 263