Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

 Score =  117 bits (294), Expect = 2e-31
 Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 6/259 (2%)

Query: 9   YRPSAYPAISLIE-ADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMS 67
           +R  A P I     AD R+  + RH H    IG IT G   + H+ +  QV  G VVLM+
Sbjct: 16  WRDDALPFIEARSIADGREVCYSRHSHAHFSIGAITAGRSTYIHEQSEFQVSAGTVVLMN 75

Query: 68  PDELHDGHAHSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIV---QDPTLFHSLQ 124
           P ++H  +   +  +   +  +E  WL          Q   F +  +   +D  LF  L+
Sbjct: 76  PGDVHACNPIDDQPWSYLMLYVETPWLTDLQHQLGFSQDSAFRRFSITHNRDIELFAGLK 135

Query: 125 QLHHLLRQDNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQLDQ 184
            L+ +L       L K     + F  + +R + + QP  +P     L    +++      
Sbjct: 136 NLYEVLVDPQQDVLYKHSAAVEFFTEVQQRLNPVDQPLREP--NFKLERAADYIRDNCTH 193

Query: 185 PIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVG 244
            ++LE + +  QLSP+   R FK   G+TP+A+L   R++ A   L+SGK   DVA + G
Sbjct: 194 MLKLEDICEAAQLSPSYLIRSFKQHYGMTPHAFLVNRRIQFARDRLRSGKLIADVALEAG 253

Query: 245 FYDQAHFSKAFKATYGLSP 263
           F DQAHF +AFK     +P
Sbjct: 254 FADQAHFQRAFKQHLAATP 272