Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., HTH-type transcriptional activator RhaS from Enterobacter sp. TBS_079

 Score =  122 bits (305), Expect = 1e-32
 Identities = 82/267 (30%), Positives = 126/267 (47%), Gaps = 23/267 (8%)

Query: 5   DTVNYRPSAY-PAISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGV 63
           D+  +R  A+ P + L  A    +AFE H H    IG I  G +RF ++G  H   +  V
Sbjct: 18  DSARFRHLAHLPGLELYHAHISDYAFEPHTHEAFGIGTIETGAERFRYRGTQHLAAEKSV 77

Query: 64  VLMSPDELHDGHAHSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIVQDPTLFHSL 123
           V M+PDE+H G + ++ G++ ++  IEP+ L         E+V G       D T    L
Sbjct: 78  VTMNPDEIHTGESATDGGWRYRMVYIEPDLL---------EEVTGLRHWWFSDVTRHDPL 128

Query: 124 --QQLHHLL-----RQDNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKE 176
             QQ+  L+       D L+Q        + F PL       ++      G H    ++E
Sbjct: 129 RSQQIGRLIYGLWHTDDPLAQKGLLLDLIETFQPLARHAPITRE------GAHRFERVRE 182

Query: 177 WVLSQLDQPIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPG 236
           ++       + L++LA +  LSP  FQR FKA   +TP+  L  +RL +A   L  G P 
Sbjct: 183 YMHDNYMHALTLDELANVVSLSPYHFQRQFKAHFHVTPHQMLMAIRLWRAKAFLTRGMPA 242

Query: 237 TDVAYQVGFYDQAHFSKAFKATYGLSP 263
            +VA   G  DQ+H ++AF   YG++P
Sbjct: 243 AEVAAATGLTDQSHLTRAFTHRYGITP 269