Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., AraC family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  102 bits (254), Expect = 9e-27
 Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 9/244 (3%)

Query: 25  RQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDGHAHSNTGYQV 84
           R   + +H H    IG +T G   + ++ A   +G G VV+M+PD++H  +  ++  +  
Sbjct: 37  RDVCYAKHSHETFSIGAVTGGRSEYLNRHAREWIGAGAVVMMNPDDVHARNPVADERWSY 96

Query: 85  QVFSIEPEWL---QQTLEANQIEQVIGFEQLIVQDPTLFHSLQQLHHLLRQDNLSQLAKD 141
           ++  ++  WL   Q  L  ++      F Q +  D  LF+ L +LH +L   +   L K 
Sbjct: 97  RMMHVDVAWLTGLQHELGFSENHAFRAFSQTVTTDAGLFNGLNRLHAILVDGDADMLRKQ 156

Query: 142 CLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLK--EWVLSQLDQPIRLEQLAQLCQLSP 199
                 F+ +    +    P V P    +L L    E++     + ++LE + +   LS 
Sbjct: 157 SAAITFFSDVQNTLN----PAVLPDHDASLQLTHAAEFIAENCTRSLKLEDICEAAGLSA 212

Query: 200 TQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAHFSKAFKATY 259
           +   R F+ + G+TP+A+L   R++ +   L+ G+   DVA   GF DQAH  + FK   
Sbjct: 213 SHLIRAFRQRYGMTPHAYLINRRIQYSRAQLRRGRVIADVALDAGFADQAHLQRVFKRLV 272

Query: 260 GLSP 263
             +P
Sbjct: 273 AATP 276