Pairwise Alignments

Query, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  115 bits (287), Expect = 1e-30
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 7/251 (2%)

Query: 17  ISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDGHA 76
           + L+ A Y +  F RH H    +G+I  G QRFY  G  H   +  ++L++ DE+H+G +
Sbjct: 17  LELLNAHYHKQNFSRHTHEGYTVGVIETGAQRFYRTGGNHVAPKHSIILVNADEVHNGCS 76

Query: 77  HSNTGYQVQ-VFSIEPEWLQQTLEANQIEQVIGFEQLIVQDPTLFHSLQQLHHLLRQDNL 135
            +  G+  + ++ +  ++   T E         F Q +VQDP L   L+     L   + 
Sbjct: 77  ATEDGWSYRAMYPVPAQFANITQEFTSTRGAPYFPQPVVQDPELAELLRLTFSTLDTSD- 135

Query: 136 SQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHN---LALLKEWVLSQLDQPIRLEQLA 192
           ++L ++ L Y     L+ R+   +    + LG +    LAL+K ++       I LE+LA
Sbjct: 136 NRLLRESLVYSSLTQLMARHG--RNYPCEHLGANAKPALALVKSFIDDHPAADISLEELA 193

Query: 193 QLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAHFS 252
            L  LSP    R F+   GL P+A+  + R+  A + +  G    DVA + GF+DQ+H +
Sbjct: 194 TLAGLSPYYLLRQFQRCYGLPPHAYQTQARVRLAKQKIGQGIKLLDVAMECGFHDQSHLN 253

Query: 253 KAFKATYGLSP 263
           + FK T GL+P
Sbjct: 254 RHFKKTVGLTP 264