Pairwise Alignments

Query, 222 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., amino acid transporter LysE (RefSeq) from Shewanella amazonensis SB2B

 Score =  103 bits (257), Expect = 2e-27
 Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 10/207 (4%)

Query: 5   SILATLAGVHFIALLSPGPDVALVVQNATQHGRKTGVMIALGLSCGILVHLILSLSGISY 64
           S+   L  V  +  +SPGP +A+VV++    GR  G+  A   + GI V+ +++L G++ 
Sbjct: 4   SVWLALLAVCCLGAMSPGPSLAMVVRHTLGGGRGAGIACAWAHAIGIGVYALITLLGLAL 63

Query: 65  LVKQQPMLFNLLQLAGGSYLLYLGAGALQSV--MAQKNASTPTHSPAPSILGNRRQAFTK 122
            +K+ P+LFN + L G  YL+++G GAL S   M  K A+    S +        +A   
Sbjct: 64  AMKEAPLLFNGIALIGALYLMWMGWGALNSKGGMQDKLAAGKASSLS--------EAARD 115

Query: 123 GMMTNLLNPKALVFFVSLLSSLIPASMSVSGKVSAAAILVGLSLTWFSCLAWLLTTSAMQ 182
           G+  +L NPK L+FF++L S  + AS ++ GK       + +   W++ +A LL+   + 
Sbjct: 116 GIAISLFNPKILLFFLALFSQFVMASSTIEGKAIIVLTPLIVDGLWYTIVALLLSHPRLL 175

Query: 183 QRMQRITRSVDSICAAVFILAGGVILW 209
            +++     +D +  A+ IL G  ++W
Sbjct: 176 PKLREKAAIIDKLSGAILILLGLRVIW 202