Pairwise Alignments

Query, 222 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., threonine efflux protein, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  143 bits (360), Expect = 3e-39
 Identities = 80/221 (36%), Positives = 127/221 (57%), Gaps = 14/221 (6%)

Query: 1   MNEMSILATLAGVHFIALLSPGPDVALVVQNATQHGRKTGVMIALGLSCGILVHLILSLS 60
           M + ++L ++A +H IAL SPGPD A++++ +    R   +M ALG++  IL H + SL+
Sbjct: 1   MLDFTLLGSIAVIHTIALASPGPDFAIMLKVSRYQTRTVAIMTALGIAAAILAHTLASLT 60

Query: 61  GISYLVKQQPMLFNLLQLAGGSYLLYLGAGALQSVMAQ---------KNASTPT---HSP 108
           G+S L+   P LF  +Q  G SYL Y+G GAL SV  Q            STPT   H+P
Sbjct: 61  GLSLLIHTTPWLFGTVQALGASYLGYMGMGALMSVRKQFLLRRELPFSAESTPTDVPHNP 120

Query: 109 APSILGNRRQAFTKGMMTNLLNPKALVFFVSLLSSLIPASMSVSGKVSAAAILVGLSLTW 168
            P +  +  + F  G+ TNLLNPKALVFF++L S+++   ++   +++   ++  LS  W
Sbjct: 121 DPVL--STAKGFRLGLYTNLLNPKALVFFLTLFSAMVGPDVNGPTRIALLVLMFTLSFAW 178

Query: 169 FSCLAWLLTTSAMQQRMQRITRSVDSICAAVFILAGGVILW 209
           F  LA LLT  + Q+ + R+   +D +   +F++    IL+
Sbjct: 179 FGLLAVLLTKGSSQRTLVRMGPIIDLVTGVLFLMVSVAILY 219