Pairwise Alignments

Query, 222 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., threonine efflux protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  162 bits (411), Expect = 4e-45
 Identities = 92/221 (41%), Positives = 137/221 (61%), Gaps = 23/221 (10%)

Query: 3   EMSILATLAGVHFIALLSPGPDVALVVQNATQHGRKTGVMIALGLSCGILVHLILSLSGI 62
           ++S+L TLA +H +AL+SPGPD A++V+ AT   R T +  A+G+S  IL H ILSL+G+
Sbjct: 2   DLSLLFTLALIHCVALVSPGPDFAIMVKIATSQPRNTAIATAVGVSVAILAHTILSLTGV 61

Query: 63  SYLVKQQPMLFNLLQLAGGSYLLYLGAGALQSVM----------------------AQKN 100
           S ++K    L+ L+QL G SYL ++G GAL++ +                      AQ N
Sbjct: 62  SLVIKSSHTLYLLVQLLGASYLAWMGFGALKATIAFFRKPKRLLKGEEAESSVATEAQAN 121

Query: 101 ASTPTHSPAPSILGNRRQAFTKGMMTNLLNPKALVFFVSLLSSLIPASMSVSGKVSAAAI 160
               + + A   L + RQ F  G+ TNLLNPKALVFF++L S+LI  S++ + KV+AA +
Sbjct: 122 TGDNSQTKAEKSL-SPRQGFMTGLYTNLLNPKALVFFLTLFSALITPSVTPATKVAAALV 180

Query: 161 LVGLSLTWFSCLAWLLTTSAMQQRMQRITRSVDSICAAVFI 201
           L  LSL WF  LA +L+ + +QQ+MQRIT  +D++   +F+
Sbjct: 181 LFVLSLIWFGFLALMLSKAKVQQKMQRITPIIDAVIGVIFM 221