Pairwise Alignments

Query, 222 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  109 bits (272), Expect = 4e-29
 Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 7/194 (3%)

Query: 16  IALLSPGPDVALVVQNATQHGRKTGVMIALGLSCGILVHLILSLSGISYLVKQQPMLFNL 75
           + ++SP  D  LV +N+  H RK G++ A+G+  G+ VH+  S+ GIS L+     LF+L
Sbjct: 12  LIVVSPSADFVLVFKNSAMHSRKAGMLTAIGIGAGVCVHISYSIIGISQLIANNAGLFSL 71

Query: 76  LQLAGGSYLLYLGAGALQSVMAQKNASTPTHSPAPSILGNRRQAFTKGMMTNLLNPKALV 135
           ++  G +YL+Y+G   L S     +  T    P        R+   +G + N+LNPK ++
Sbjct: 72  VKYVGAAYLIYIGIAGLLSAKLTLDYGTQLIKPV-----ENRKYIMQGFLCNVLNPKTMI 126

Query: 136 FFVSLLSSLIPA-SMSVSGKVSAAAILVGLSLTWFSCLAWLLTTSAMQQRMQRITRSVDS 194
           FF+S+ S LI + S S++  +S    +  L   WF  +A+L+T++   + ++R    ++ 
Sbjct: 127 FFLSVFSQLISSHSDSLAFVISYGVYIAVLHGIWFCIVAYLVTSAKATRVLKRFGHRINQ 186

Query: 195 ICAAVFILAGGVIL 208
            C  V ++  GVIL
Sbjct: 187 AC-GVGLITFGVIL 199