Pairwise Alignments

Query, 222 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., efflux protein, LysE family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 86.7 bits (213), Expect = 4e-22
 Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 41/239 (17%)

Query: 5   SILATLAGVHFIALLSPGPDVALVVQNATQHGRKTGVMIALGLSCGILVHLILSLSGISY 64
           S +  LAG+  +  ++PGPD  LV++N  + G + GV  ALG + G+LVHL  S  G+S 
Sbjct: 3   SDILALAGLAALLTVTPGPDTMLVLRNVLRGGTRGGVSTALGSAAGLLVHLSASALGVSA 62

Query: 65  LVKQQPMLFNLLQLAGGSYLLYLGAGALQSVMAQKNASTPT------------------- 105
           ++      F  ++LAG  YLL+LGA +L + +  K  STP                    
Sbjct: 63  VLLHSAEAFATVRLAGACYLLWLGARSLYAAL--KGPSTPDAAREAHAGGEGLPCCADRG 120

Query: 106 ------HSPAPSILGNRR-------QAFTKGMMTNLLNPKALVFFVSLLSSLIPASMSVS 152
                  +P+ ++ G          QA+ +G +TN+LNPK  VF++++L  +  ++ +  
Sbjct: 121 SASGNGEAPSDALSGEYGTGTAPLVQAWREGFLTNVLNPKVAVFYLAVLPQVAVSAGATV 180

Query: 153 GKVSA--AAILVGL-----SLTWFSCLAWLLTTSAMQQRMQRITRSVDSICAAVFILAG 204
              +A   ++L GL      + WFS L+  L           + R +D    A+ +  G
Sbjct: 181 DTTTALGRSLLFGLFHIIIGVCWFSFLSCSLQRVRTTLLRPMVRRWLDGGVGALMVFFG 239