Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., DNA helicase II protein from Sinorhizobium meliloti 1021

 Score =  464 bits (1194), Expect = e-135
 Identities = 303/824 (36%), Positives = 431/824 (52%), Gaps = 128/824 (15%)

Query: 8   LDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKA 67
           + GLN +QREAV A    +L+LAGAG+GKTRVL  RIA ++S   A P  ++AVTFTNKA
Sbjct: 44  VSGLNPEQREAVEALEGPVLVLAGAGTGKTRVLTTRIAHILSTGRAYPSQILAVTFTNKA 103

Query: 68  AAEMRGRIEELMHGTASGM-WCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKR 126
           A EM+ RI  L+     GM W GTFH I  ++LR H     L  DF I+D+DD  RL+K+
Sbjct: 104 AREMKERIGVLVGHAVEGMPWLGTFHSIGVKLLRRHAELVGLRSDFTILDTDDVVRLIKQ 163

Query: 127 LIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFDPVTQTYLK---LYTAYQEACDR 183
           LI+A  LDDK+WPA+Q A  I+  K++GL P+ I   D       K   LY AYQ     
Sbjct: 164 LIQAEGLDDKRWPAKQFAGMIDTWKNKGLDPSQIPEGDARAFANGKGRELYAAYQNRLLT 223

Query: 184 AGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMA------ 237
               DF ++LL  + + R N  + + Y A+F++ILVDE+QDTN  QY WLR++A      
Sbjct: 224 LNACDFGDLLLHPIRMFRANPDVLKEYHAKFRYILVDEYQDTNTAQYMWLRLLAQQTQAS 283

Query: 238 ---------------------GAQS--------------------NVMIVGDDDQSIYGW 256
                                 A+S                    N+  VGDDDQSIYGW
Sbjct: 284 RNRPSSGLPATFSPSDGEKGQAARSQSPLSPSERGEGRGEGQPTVNICCVGDDDQSIYGW 343

Query: 257 RGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANNSERMGKQLWTDGLV-- 314
           RGA V+NI +F ++FP    I+LE+NYRST+ IL A+  LIA+N  R+GK L+T+     
Sbjct: 344 RGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRLGKTLFTERTNPD 403

Query: 315 GEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQSRVLEEALLQASLAY 374
            E + V++A++  +EAR +  +I+  Q +   L D +IL R + Q R  E+  +   L Y
Sbjct: 404 DEKVHVHAAWDSEEEARAIGEEIEQLQRKKHNLNDISILVRASFQMREFEDRFVTLGLNY 463

Query: 375 RIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGDKTLETIRFAARDRG 434
           R+ GG RF+ER EI+DA++Y RL+    DD AFER++NTP RGLG+ T+ T+   AR R 
Sbjct: 464 RVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGETTVRTLHDYARARD 523

Query: 435 CTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVLTDHAVKTSGLLEMY 494
             +  A+  ++    L  +A   L   V      +      P   L +  +  SG   M+
Sbjct: 524 IPMLAAASDIVETDELKPKARKGLFDVVADFRRWQTLLETTPHTELAERILDESGYTAMW 583

Query: 495 QQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAALEAGEGQADEHDDAV 554
           Q +K  ++  R+ENL+EL+ +   FE          +  FL H AL   + + +E+ DAV
Sbjct: 584 QADKSAEAPGRLENLKELIRSMEAFES---------MRGFLEHVAL-VMDAEQNENMDAV 633

Query: 555 QLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGR--LEEERRLCYVGMTRAMQKLYI 612
            +MTLHSAKGLEF  VF+ G EEG+FP Q + +E GR  LEEERRL YVG+TRA ++ +I
Sbjct: 634 SIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRAGLEEERRLAYVGITRAKRRCHI 693

Query: 613 TYAEMRRLYGQDKYHKPSRFIRELP----EGCLDEV------------------------ 644
            +   RR++G  +   PSRF+ ELP    E    EV                        
Sbjct: 694 WFVSNRRIHGLWQSTLPSRFLDELPIAHVEVAEQEVSYGGYGRGGYGQSRFDKADPFENN 753

Query: 645 ----------RMKAQVSRPTSTGRFSQTVVKESFNETG---------------------F 673
                     + +++ +R     R    + +  + E+G                     F
Sbjct: 754 YQTPGWKRAQQHRSEATRDNWGTRSGHAIERIGYGESGPRTRTIEGELVAKSTSAEPSRF 813

Query: 674 NLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAY 717
           N+G RV H KFG G I   EG    +++ + F+  G K ++  +
Sbjct: 814 NVGDRVFHIKFGNGNIAAIEG----NKLTIDFDRAGQKRVLDGF 853