Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 721 a.a., DNA-dependent helicase II (RefSeq) from Shewanella amazonensis SB2B

 Score =  964 bits (2492), Expect = 0.0
 Identities = 469/723 (64%), Positives = 585/723 (80%), Gaps = 3/723 (0%)

Query: 2   IDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAV 61
           +D S LLDGLNDKQREAVAAP  ++L+LAGAGSGKTRVL HRIAWL+ VE  SP+S++AV
Sbjct: 1   MDVSFLLDGLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLLQVENQSPYSILAV 60

Query: 62  TFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQ 121
           TFTNKAAAEMR R+E+++      MW GTFHG+ HR+LR H+ DA L + FQI+DSDDQQ
Sbjct: 61  TFTNKAAAEMRERVEKIVGHNTGRMWIGTFHGLAHRLLRTHWQDAGLPQSFQIMDSDDQQ 120

Query: 122 RLLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFD-PVTQTYLKLYTAYQEA 180
           RLLKR++K+ NLD+KQ+P R VA +IN +KD+GLRP HI+A   P+ Q  L+LY  YQ++
Sbjct: 121 RLLKRILKSMNLDEKQYPPRLVAGYINGKKDQGLRPAHIDAGPFPMEQKLLELYRIYQDS 180

Query: 181 CDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQ 240
           CDRAGLVDFAEILLRA EL     H+  HYQ RF+HILVDEFQDTNAIQYAW+R++AG  
Sbjct: 181 CDRAGLVDFAEILLRAHELWLNKPHLLAHYQDRFRHILVDEFQDTNAIQYAWIRVLAGNT 240

Query: 241 SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN 300
           +NVMIVGDDDQSIYGWRGA++EN+ +F ++FP   TIRLEQNYRST  IL+ASN LIANN
Sbjct: 241 ANVMIVGDDDQSIYGWRGAQIENLHRFLQDFPGAKTIRLEQNYRSTGNILKASNELIANN 300

Query: 301 SERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS 360
            +RMGK+LWT+   GEPIS+Y A+NE+DEARF+V +I  WQ++GG L +CAILYR+NAQS
Sbjct: 301 PDRMGKELWTEDKDGEPISLYCAFNEMDEARFIVGRISDWQDKGGMLGECAILYRSNAQS 360

Query: 361 RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGD 420
           RVLEEALL   + YRIYGG+RFFERQEIKDA+ YLRLI+NR+DD AFERV+NTP RG+G+
Sbjct: 361 RVLEEALLHKGMPYRIYGGLRFFERQEIKDAMGYLRLISNRDDDAAFERVVNTPARGIGE 420

Query: 421 KTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVL 480
           +TL+ +R  AR    TLW  S+ LL ++VL+GRAA+A+  F++LI  L  +  ++PL+ +
Sbjct: 421 RTLDILRSTARKEQLTLWQTSLRLLEEKVLSGRAANAVKGFLDLIVQLRSDTDELPLYRV 480

Query: 481 TDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAAL 540
            DH ++ SGL  MY+ EKGE ++AR+ENLEELVTA R FE PEE ++M  L AFL+HAAL
Sbjct: 481 ADHVIQHSGLKAMYEAEKGENAQARVENLEELVTAARSFEMPEELEDMGELNAFLSHAAL 540

Query: 541 EAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY 600
           EAGEGQAD H DAVQLMTLHSAKGLEFP+VFM GVEEG+FPS+++ EE  RLEEERRLCY
Sbjct: 541 EAGEGQADAHTDAVQLMTLHSAKGLEFPMVFMAGVEEGIFPSKLALEEGDRLEEERRLCY 600

Query: 601 VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGRFS 660
           VGMTRAMQKLYITYAE RR+YG++ Y +PSRFIRE+P   ++E+R+KAQVS P    RF+
Sbjct: 601 VGMTRAMQKLYITYAESRRIYGREDYARPSRFIREIPPEYVEEIRLKAQVSAPLVANRFA 660

Query: 661 QTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL 720
               +++FN++G  +G RVRH KFGEGT+ N+EGSGPQ+RVQV F+  G KWLV +YA+L
Sbjct: 661 H--AQQTFNDSGLKIGGRVRHFKFGEGTVTNYEGSGPQARVQVQFDDFGSKWLVVSYAKL 718

Query: 721 EKV 723
           E +
Sbjct: 719 ESL 721