Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 767 a.a., ATP-dependent DNA helicase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  456 bits (1174), Expect = e-132
 Identities = 274/768 (35%), Positives = 419/768 (54%), Gaps = 63/768 (8%)

Query: 8   LDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKA 67
           L GLN +QR AV      ++I+AGAGSGKTRV+  R+A L+      PF+++ +TFTNKA
Sbjct: 4   LAGLNPQQRAAVENTKGPVMIVAGAGSGKTRVITFRVAHLIQTG-TDPFNILVLTFTNKA 62

Query: 68  AAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKRL 127
           + +MR RI +++   A  +W GTFH +  +ILR          +F I D+DD + +++ +
Sbjct: 63  SKDMRERISKVVGAEAKNIWMGTFHSVFAKILRVEAEKIGYPSNFTIYDTDDSKSVIRAI 122

Query: 128 IKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFDPVTQTYLK--------LYTAYQE 179
           +K   LDDK + A  V   I++ K+  +      A D +    ++        +Y  Y +
Sbjct: 123 LKEMQLDDKLYAANFVFNRISSAKNNLISWGEYQANDQIQAEDIQNKRPLIGQIYETYAK 182

Query: 180 ACDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGA 239
            C RAG +DF ++L +   LL+ +  +   YQ +F++++VDE+QDTN  QY  ++ +A A
Sbjct: 183 RCFRAGAMDFDDLLFKTNILLKEHPDVLNKYQQKFRYLMVDEYQDTNFSQYTIVKKLAAA 242

Query: 240 QSNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIAN 299
             N+ +VGDD QSIY +RGA ++NI  F R++P +   +LEQNYRST+ I++A++++IAN
Sbjct: 243 YQNICVVGDDAQSIYAFRGANIQNILNFERDYPDLKVYKLEQNYRSTQNIVDAASSIIAN 302

Query: 300 NSERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKI------KGWQEQGGTLTDCAIL 353
           N  ++ K +++D   G+ I V  A+ + +E + V   I      KG+Q       D AIL
Sbjct: 303 NKNQLEKNVFSDNEPGDRIKVSRAFTDNEEGKLVAEAIIQERSTKGYQH-----NDFAIL 357

Query: 354 YRNNAQSRVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINT 413
           YR NAQSR +EE L + ++ YRIYGG  F++R+EIKD ++Y RL  N  D+ A +RVIN 
Sbjct: 358 YRTNAQSRAMEEGLRKLNIPYRIYGGQSFYQRKEIKDLIAYFRLTFNPKDEEAIKRVINY 417

Query: 414 PPRGLGDKTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGI 473
           P RG+GD +++ I  AA   G T+WD        + + GR A+ L+ F  ++ + + E  
Sbjct: 418 PKRGIGDTSIDKIIVAADQHGKTMWDVISNA--HEYVDGRLANQLNDFAMMVQSFQAEAK 475

Query: 474 DMPLHVLTDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTA 533
            +  +       + +G+L+    +   + +AR EN++EL+   ++F + E+ +E  +   
Sbjct: 476 KLDAYDTALFIAQHAGILKELYTDDSVEGRARYENIQELLNGIKEFAEREDIEEKGLDIF 535

Query: 534 FLTHAALEAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLE 593
               A L   +   D++ D V LMT+HSAKGLEF  VF+VG+EE +FPSQMS      LE
Sbjct: 536 MQDVALLTNDDKDGDKNKDTVSLMTIHSAKGLEFKNVFIVGLEENLFPSQMSLTNRTDLE 595

Query: 594 EERRLCYVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELP---------------- 637
           EERRL YV +TRA  KL +TYA  R  +G     +PSRFI E+                 
Sbjct: 596 EERRLFYVAITRAEVKLTLTYATSRYRWGTLTNCEPSRFINEISPKFLELDVKPAKSTSF 655

Query: 638 EGCLDEVRMK-----------------AQVSRPTSTGRFSQTVVKESFNETGFNL----- 675
           +G  D+ R                   A  S P    + +  + K      GF       
Sbjct: 656 DGNFDDDRKTWTSQPRDFFSKPKPAAGATTSAPPVRPKTTSLLAKAHVPTPGFTPSQPHE 715

Query: 676 ---GSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL 720
              G  V H KFG G II+ EG+ P  +  V F G G K L+  +A+L
Sbjct: 716 FQGGMEVEHEKFGFGKIISLEGTLPDVKATVFFQGLGNKQLLLKFAKL 763