Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 735 a.a., DNA/RNA helicase, superfamily I from Dechlorosoma suillum PS

 Score =  655 bits (1689), Expect = 0.0
 Identities = 350/737 (47%), Positives = 477/737 (64%), Gaps = 31/737 (4%)

Query: 7   LLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNK 66
           LL  LN +Q +AV  P ++ LILAGAGSGKTRVL  RIAWL+S  +  P +V+AVTFTNK
Sbjct: 4   LLANLNPEQLQAVTLPPQHALILAGAGSGKTRVLTTRIAWLISTGQMGPHAVLAVTFTNK 63

Query: 67  AAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKR 126
           AA EM  R+  ++     GMW GTFHG+C+R+LRAH+ +A L   FQI+DS DQ   +KR
Sbjct: 64  AAKEMLARLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSLFQILDSADQLSAIKR 123

Query: 127 LIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFDPVTQTYLKLYTAYQEACDRAGL 186
           L+K  N+DD+++P R++  +IN  KD+GLRP     +D  T+  ++L+  Y+  C R G+
Sbjct: 124 LLKNLNVDDEKFPPRELMHFINAHKDQGLRPAQAEVWDDYTRRRVELWAEYEGQCQREGV 183

Query: 187 VDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQSN---- 242
           VDFAE+LLR  ELL  N+ +R HYQ RF+HILVDEFQDTN +QYAWL+++AG   +    
Sbjct: 184 VDFAELLLRTYELLSRNEPLRRHYQERFRHILVDEFQDTNRLQYAWLKLLAGHDGSAGAP 243

Query: 243 ----VMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIA 298
               V  VGDDDQSIY +RGA V N+  F REF   N IRLEQNYRS   IL+A+N LI 
Sbjct: 244 QGAAVFAVGDDDQSIYAFRGAEVGNMRDFEREFGVQNVIRLEQNYRSHGNILDAANALIK 303

Query: 299 NNSERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNA 358
           NN  R+GK LWTD   GEPI V+  +++LDEAR++V + +    +G +    A LYR+NA
Sbjct: 304 NNQGRLGKNLWTDQGAGEPIRVFEGFSDLDEARWIVDEARELIREGISRDQIAFLYRSNA 363

Query: 359 QSRVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGL 418
           QSRVLE  L    +AY++YGG+RFFERQEIK AL+YLRL+ N +DDTAF RV+N P RG+
Sbjct: 364 QSRVLEHELFTKGVAYKVYGGLRFFERQEIKHALAYLRLLANPDDDTAFLRVVNFPTRGI 423

Query: 419 GDKTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLH 478
           G ++LE ++ AA      L++A+        LTG+A +A+  F+ LI  L  E  ++PL 
Sbjct: 424 GARSLENLQEAAHRSNSPLYNAAAS------LTGKAGAAVGAFIRLIEELRRETENLPLP 477

Query: 479 VLTDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEM---------- 528
            + +H ++ SGL + Y  EK  + + R+ENL+EL+ A   F   E A  +          
Sbjct: 478 EVVEHIIERSGLRQHYLGEK--EGQERLENLDELINAAASFIAEEGAMPVPDPATPDAPL 535

Query: 529 -TMLTAFLTHAALEAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAE 587
            + L +FL HA+LEAG+ QA +  +AVQLMT+H+AKGLEF +VF+ G+E+G+FP + S  
Sbjct: 536 PSPLASFLAHASLEAGDHQAGDGQEAVQLMTVHAAKGLEFDVVFISGLEQGLFPHENSVM 595

Query: 588 EAGRLEEERRLCYVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMK 647
           E    EEERRL YV +TRA Q+LY+++A+ R L+GQ +Y  PS F+ ELP+  L  V  +
Sbjct: 596 EKSGEEEERRLMYVAITRARQRLYMSHAQTRMLHGQTRYCVPSAFLDELPQELLLRVNAR 655

Query: 648 AQVSRPTSTGRFSQTVVK----ESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQV 703
           +  +   S  R  +        ES    G  +G  V H KFG+G I+  EG G  +RVQV
Sbjct: 656 STPAYDNSYSRSPRAAAPVTAYESAAPAGLRVGQNVSHAKFGQGVIVATEGRGADARVQV 715

Query: 704 AFNGEGIKWLVTAYARL 720
            F   G+KWL   +A+L
Sbjct: 716 NFGSAGMKWLALEFAKL 732