Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., DNA/RNA helicase, superfamily I from Dechlorosoma suillum PS

 Score =  380 bits (977), Expect = e-110
 Identities = 247/661 (37%), Positives = 370/661 (55%), Gaps = 17/661 (2%)

Query: 8   LDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKA 67
           L  LN  QREA+      LL+LAGAGSGKTRV+  +IA+L+     +P ++ A+TFTNKA
Sbjct: 7   LHSLNPPQREAIYYLDGPLLVLAGAGSGKTRVITQKIAYLIQECGMNPANIAAITFTNKA 66

Query: 68  AAEMRGRIEELMHG-TASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKR 126
           A EM+ R+ +L+ G + +G+   TFH +  RILR           F I DS D   +   
Sbjct: 67  AREMQERVGQLLQGGSTAGLTICTFHSLGVRILREEAKALGYKPKFSIFDSTDCYSIFAD 126

Query: 127 LIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHI--NAFDPVTQTYLKLYTAYQEACDRA 184
           L  + +    +   R + W ++  K+    P      A   +     K Y  Y       
Sbjct: 127 LSASVD----KATIRSIQWLVSGWKNAMKSPDQAAAEAKSEIEVLAAKAYRDYAATLKAY 182

Query: 185 GLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQSNVM 244
             VDF +++L  ++L + +  IR+ +Q R +++LVDE+QDTNA QY  L+++ G ++   
Sbjct: 183 QAVDFDDLILLPMQLFQEHPKIRDKWQNRLRYLLVDEYQDTNACQYQLLKLLTGPRAMFT 242

Query: 245 IVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANNSERM 304
            VGDDDQ+IYGWRGA VEN+    R++P++  I LEQNYRST  IL+A+N +I NN +  
Sbjct: 243 AVGDDDQAIYGWRGADVENLRGLPRDYPNLKLIMLEQNYRSTARILQAANNVIGNNEKLF 302

Query: 305 GKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQ-EQGGTLTDCAILYRNNAQSRVL 363
            K+LW+D   GE I      +   EA  VV K+   + E+    +D AILYR+N Q+R+ 
Sbjct: 303 EKKLWSDLGHGEAIRGSVCRDNEHEAESVVMKLLADKFEKRSKFSDYAILYRSNHQARLF 362

Query: 364 EEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGDKTL 423
           E  L    + Y + GG  FFE+ EIKD ++YLRL+ N++DD AF R + TP RG+G  TL
Sbjct: 363 ETHLRNNRVPYVMSGGTSFFEKSEIKDVIAYLRLLANQDDDPAFIRAVTTPKRGVGGTTL 422

Query: 424 ETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPL-HVLTD 482
           E +   A +R  +L+ A+      Q ++ R    L +F E IN +E+  +  P   VL D
Sbjct: 423 EALGTYAGERHISLFAAAFEEGFAQRVSHRQLEPLLQFCEFINRVEQRALREPAGEVLND 482

Query: 483 HAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAALEA 542
                     +Y  E+   + ++  N+ E    ++      E  E T++    T A +  
Sbjct: 483 MLTAIGYEAWLYDHEETRAADSKWGNVREF---SQWLAGKGEKDEKTLIDLTQTIALINM 539

Query: 543 GEGQADEHD-DAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCYV 601
            + Q ++ + DAVQL TLH+AKGLE+  VF+VGVEEG+ P   S+ E+G +EEERRL YV
Sbjct: 540 LDKQNEDSEFDAVQLSTLHAAKGLEYKNVFLVGVEEGILP-HSSSVESGTVEEERRLMYV 598

Query: 602 GMTRAMQKLYITYAEMRRLYGQDKYH-KPSRFIRELPEGC-LDEVRMKAQVSRPTSTGRF 659
           G+TRA Q L++++ E R+  G++ Y  +PSRFI E+     +   +  A+  + TS  RF
Sbjct: 599 GITRARQHLHLSWCEKRK-QGKEMYPCEPSRFIAEMGNDLRISGGKAAAEPDKATSKARF 657

Query: 660 S 660
           +
Sbjct: 658 A 658