Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 773 a.a., UvrD/REP helicase from Marinobacter adhaerens HP15

 Score =  164 bits (415), Expect = 2e-44
 Identities = 176/662 (26%), Positives = 299/662 (45%), Gaps = 58/662 (8%)

Query: 7   LLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNK 66
           L D L D+QR  + A  EN +I A AGSGKT  L  RI +L+  +   P  ++ + F   
Sbjct: 29  LPDFLTDEQRAIITAGYENSVITAVAGSGKTSTLAWRIRYLLE-QGHDPDRMLVLMFNRS 87

Query: 67  AAAEMRGRIEELMHGTASGM-WCGTFHG----ICHRILRAHYLDA---KLLEDFQIIDSD 118
           A  +   +++E+   +   +    T+H     +  R +R  YL     K+L + +I  S 
Sbjct: 88  ARVDFERKLQEVCARSGLALPEIRTYHAMGLRLYKRFVREGYLPGFSDKILTEQEI--SF 145

Query: 119 DQQRLLKRLIKAHNLDDKQWPAR---QVAWWINNQKDEGLRPTHIN----AFDPVTQTYL 171
              +L +RL      D+ +   +   + A    +     L P  I      +    +  +
Sbjct: 146 QAWQLTRRLAPEDLADEIRRNKKDFVETATGFIDLVKTTLSPAEIVFEELGYSDKHKYLI 205

Query: 172 KLYTAYQEACDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYA 231
            L+ ++++     G + +A++L   +  +  N  ++     +   ILVDE+QDTN IQ+ 
Sbjct: 206 DLFHSFEQWRKSQGRISYADMLYEPVMAIHQNPPLQRLVGNKMDLILVDEYQDTNEIQHL 265

Query: 232 WLRMMAGAQSNVMIVGDDDQSIYGWRGARVENI-EKFTREFPSVNTIRLEQNYRSTKTIL 290
            LR +AG ++ V +VGD DQ+IY +RGA+ E I ++F+ EF S     L   +R    + 
Sbjct: 266 LLRYVAGDRARVTVVGDPDQTIYEFRGAKPEFILKRFSDEFESPLEQTLSYTFRYGHRVA 325

Query: 291 EASNTLIANNSERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDC 350
             +N LI +N+ R  K +        P +  + +    +A  V+  ++G  E    L   
Sbjct: 326 LLANHLICHNTGR--KDVLCHSHASTPGTEITLHRSESDADTVLQILQGQSEP--ALAGT 381

Query: 351 AILYRNNAQSRVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFE-- 408
           AIL+R  +QS  +E  LL   + YRI  G      +E++   + L ++  + ++   E  
Sbjct: 382 AILFRVWSQSVPIELKLLARQIPYRIDAGKGALFSREVQAITALLMVVTGKLENLPDEDR 441

Query: 409 -----RVINTPPRGLGDKTLETI-RFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFV 462
                +++  P  GL +  LE + RF A     + W   +  ++   L   AA  L +  
Sbjct: 442 LELARQLLRFPHVGLKEPELEQLARFLA--GFSSGWHERLLAMDFDALAPMAARKLRKLG 499

Query: 463 ELINALEEEGIDMPLHVLTDHAVKTSGLLEMYQQE----KGEKSKARI-ENLEELVTATR 517
           E++  L   G               +GL+ +Y +     +G +S A   E+ EE +   +
Sbjct: 500 EVLAQLHSYG------------GPVAGLISVYAEHTDLYEGIRSLALTHESAEERIDTIQ 547

Query: 518 QFEKPEEAQEMTMLTAF--LTHAALEAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGV 575
            F +  ++ ++T   A   L     +AGE Q       V L T+H  KGLE+P V + G+
Sbjct: 548 GFRQYLKSLDVTAEGALEHLKTLKQQAGEKQ----QGGVLLSTIHRTKGLEWPTVIIPGL 603

Query: 576 EEGMFPSQMSAEEAGR--LEEERRLCYVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFI 633
           +E   P     ++  R  LE ERRL YV MTR  Q+L++      +    D    PSRF+
Sbjct: 604 QEKYLPYSPRPQDNARAFLESERRLLYVAMTRTRQQLHLITRPASKQPHLDGDLGPSRFV 663

Query: 634 RE 635
            E
Sbjct: 664 EE 665