Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 721 a.a., UvrD/REP helicase from Marinobacter adhaerens HP15

 Score =  817 bits (2110), Expect = 0.0
 Identities = 402/723 (55%), Positives = 540/723 (74%), Gaps = 7/723 (0%)

Query: 2   IDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAV 61
           +D S ++D LND QREAV A  ++LL+LAGAGSGKTRVLVHRIAWLM+V+   P  ++AV
Sbjct: 1   MDVSHIIDPLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTGILAV 60

Query: 62  TFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQ 121
           TFTNKAA EMR RIE++M   A G+W GTFHGI HR+LR+H+ DA L E+FQ++DSDDQ 
Sbjct: 61  TFTNKAAKEMRYRIEQMMDIPARGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQL 120

Query: 122 RLLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHI--NAFDPVTQTYLKLYTAYQE 179
           RL+KR+++ + +D+ +WP +Q  W+I++QKDEGLR  HI  N  D      LK+Y  Y++
Sbjct: 121 RLIKRVMRENQIDESKWPPKQAQWFISSQKDEGLRVDHIQENPGDHFLSIMLKIYRQYEK 180

Query: 180 ACDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGA 239
            C + GLVDF E+LLR+ EL      +  HYQ+RF+HILVDEFQDTN IQYAWL+++A  
Sbjct: 181 LCQQGGLVDFGELLLRSHELWLHRPELLAHYQSRFQHILVDEFQDTNTIQYAWLQVLASN 240

Query: 240 QSNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIAN 299
           +  + +VGDDDQSIYGWRGA+VENI+++ R+FP+   +RLEQNYRST+ IL+A+N +IAN
Sbjct: 241 RVPMTVVGDDDQSIYGWRGAKVENIQQYQRDFPNARLVRLEQNYRSTQMILKAANAVIAN 300

Query: 300 NSERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQ 359
           N  R+GK+LWTDG  GEPIS+Y+A+NE DEA ++   I  W + G   ++ AILYR+NAQ
Sbjct: 301 NQGRLGKELWTDGPEGEPISLYAAFNEQDEANYIADSISAWVQDGNLRSESAILYRSNAQ 360

Query: 360 SRVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLG 419
           SRVLEE+L++  + YR+YGG+RF++RQEI++AL+YLRL+  R DD AFERV+N PPRG+G
Sbjct: 361 SRVLEESLMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYRRDDAAFERVVNVPPRGIG 420

Query: 420 DKTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHV 479
            K+L  +R  A ++  +LW+++  LL+   + GRA + L  F+ +I  L E   D  LH 
Sbjct: 421 AKSLAELREYATEQSISLWESAERLLDAGQVKGRAKTGLQSFIAIIEGLSEMVGDASLHG 480

Query: 480 LTDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAA 539
           L    ++ SGL + +  EKGEK +AR+ENLEELV A   +E  +    +  L+ F+  AA
Sbjct: 481 LMKQTIENSGLKDYHASEKGEKGQARVENLEELVNALSDYEVED---GVDALSEFIAQAA 537

Query: 540 LEAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC 599
           L+AGE QA +H+D+VQLMTLHSAKGLEFPLVF+ GVEEG+FP  MS EE GR+EEERRL 
Sbjct: 538 LDAGESQAGDHEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHGMSLEEPGRMEEERRLA 597

Query: 600 YVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGRF 659
           YVG+TRAM+KL +TYAE RRLYGQ+K++  SRF+RE+P  CL EVR++  V+RP    R 
Sbjct: 598 YVGITRAMKKLVLTYAESRRLYGQEKFNALSRFVREIPGDCLQEVRLRNTVTRPAMVERP 657

Query: 660 SQTVV-KESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYA 718
           ++++  ++S  ++GF+LG RVRHPKFGEG ++N EG+G  +RVQV F+ EG KWLV AYA
Sbjct: 658 NESMFSQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFD-EGAKWLVLAYA 716

Query: 719 RLE 721
            LE
Sbjct: 717 PLE 719