Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 786 a.a., UvrD-helicase domain-containing protein from Ralstonia sp. UNC404CL21Col

 Score =  621 bits (1602), Expect = 0.0
 Identities = 356/792 (44%), Positives = 473/792 (59%), Gaps = 85/792 (10%)

Query: 7   LLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNK 66
           LL  LN +QR A+  P E+ LILAGAGSGKTRVL  RIAWL+     SP  V+AVTFTNK
Sbjct: 4   LLANLNPEQRAAITLPDESALILAGAGSGKTRVLTTRIAWLIQSARVSPSGVLAVTFTNK 63

Query: 67  AAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKR 126
           AA EM  R++ ++      MW GTFHG+C+R+LRAH+ DA L + FQI+D+ DQ   +KR
Sbjct: 64  AAKEMTARLQAMLPINTRAMWIGTFHGLCNRLLRAHFRDAGLPQTFQILDTQDQLSAVKR 123

Query: 127 LIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFDPVTQTYLKLYTAYQEACDRAGL 186
           L+K+ N+DD+++P + V ++IN  K++GLR   +   +   +    LY AY   C R G+
Sbjct: 124 LLKSLNIDDEKFPPKNVQYFINGAKEQGLRAGDLEIANEYDRRMADLYAAYDAQCQREGV 183

Query: 187 VDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAG------AQ 240
           VDFAE+LLR  ELLR N  IR HYQ RFKHILVDEFQDTN +QYAWL+++AG        
Sbjct: 184 VDFAELLLRCYELLRYNDAIRAHYQRRFKHILVDEFQDTNKLQYAWLKILAGLGEPGVTP 243

Query: 241 SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN 300
           + +  VGDDDQSIY +RGA V N+  F REF   + I+LEQNYRS   IL+ +N LI++N
Sbjct: 244 NAIFAVGDDDQSIYAFRGANVGNMVDFEREFRVEHRIKLEQNYRSHGHILDTANHLISHN 303

Query: 301 SERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS 360
           + R+GK L TD   GEP+ VY A  +  EA ++V +I+     G + ++ AILYR+NAQS
Sbjct: 304 TRRLGKNLRTDAGHGEPVRVYQAATDGQEAGWIVDEIRDRIATGMSRSEIAILYRSNAQS 363

Query: 361 RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGD 420
           RV+E AL  A + Y++YGG+RFFER EIK AL+YL+L+ N ++D AF RV+N P RG+G 
Sbjct: 364 RVIEHALFSAGIPYKVYGGLRFFERAEIKHALAYLQLLENPDNDAAFGRVVNFPARGVGA 423

Query: 421 KTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVL 480
           ++LE ++ AAR  G +L  A         LTG A + LS FV LI  +  +   M L  +
Sbjct: 424 RSLEQLQDAARLYGISLAAAV------PYLTGAAGTKLSAFVRLIEQMRADTRQMTLPEI 477

Query: 481 TDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQF--------------------- 519
             H +  SGL+  YQ EK  + + RIENL+ELVTA + F                     
Sbjct: 478 VQHVIHASGLITHYQGEK--EGQDRIENLQELVTAAQAFVAEEGYGVDAIATALPVRHDA 535

Query: 520 ---------------EKPEEAQEMTMLTAFLTHAALEAGEGQADEHDDAVQLMTLHSAKG 564
                             E   EMT L AFLTHA+LEAG+ QA    DAVQ+MT+H+AKG
Sbjct: 536 MLRIEGGEIDTASELVTDETPAEMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKG 595

Query: 565 LEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCYVGMTRAMQKLYITYAEMRRLYGQD 624
           LEF +VF+ G+EEG+FP + S  E   LEEERRL YV +TRA ++LY+++A+ R L+GQ 
Sbjct: 596 LEFHVVFITGLEEGLFPHENSQMEKDGLEEERRLMYVAITRARERLYLSFAQSRVLHGQI 655

Query: 625 KYHKPSRFIRELPEGCLDEVRMK------------------------------AQVSRPT 654
           +YH  SRF  ELPE  L  +  +                              A   RPT
Sbjct: 656 RYHIRSRFFDELPEDTLKWLTPQHAGYQATRRVQGDTAWGKDWFKRPERGDDDAYTGRPT 715

Query: 655 ---STGRFSQTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIK 711
               TG+       +    TGF +G  V H KFGEG I   EG G ++R Q+ FN  G+K
Sbjct: 716 GGMDTGK--NYADAKRAEATGFRVGQSVFHNKFGEGVITTLEGEGAEARAQIKFNRHGVK 773

Query: 712 WLVTAYARLEKV 723
            L    A+L+ +
Sbjct: 774 TLALGIAKLDPI 785