Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., ATP-dependent DNA helicase from Burkholderia phytofirmans PsJN

 Score =  251 bits (640), Expect = 1e-70
 Identities = 205/664 (30%), Positives = 310/664 (46%), Gaps = 53/664 (7%)

Query: 3   DPSLLLDGLNDKQREAV-------AAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASP 55
           D +  L  LND QREAV        AP   LL++AGAGSGKT  L HR+A L+ V+ A P
Sbjct: 23  DSAAWLAKLNDAQREAVDYGADTPTAPPGALLVIAGAGSGKTNTLAHRVANLV-VKGADP 81

Query: 56  FSVMAVTFTNKAAAEMRGRIEELMHGTASGM---------WCGTFHGICHRILRAHYLDA 106
             ++ +TF+ +AA EM  R+  +  G A G          W GTFH +  R+LR +    
Sbjct: 82  RRILLLTFSRRAALEMTRRVTRIA-GAALGSRAALAQGLTWSGTFHSVGARLLREYADLI 140

Query: 107 KLLEDFQIIDSDDQQRLLKRLIKAHNLDDKQ--WPARQVAWWINNQ---KDEGLRPTHIN 161
            L   F I D +D   L+  +     L  K+  +PA+   + I ++       L      
Sbjct: 141 GLAPAFTINDREDSADLMNLVRHELGLSAKERRFPAKGTCFAIYSRVVNTGASLGQVLDK 200

Query: 162 AFDPVTQ---TYLKLYTAYQEACDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHIL 218
           AF    +       L+ AY EA  +  ++D+ ++LL    +      I      RF H+L
Sbjct: 201 AFPWCREWEADLRMLFAAYVEAKQKQSVLDYDDLLLYWSHMA-AEPGIAADLSGRFDHVL 259

Query: 219 VDEFQDTNAIQYAWLRMMAGAQSNVMIVGDDDQSIYGWRGARVENIEKFTREF-PSVNTI 277
           VDE+QDTN +Q + L  +      + +VGDD QSIY +RGA V NI  F   F P    +
Sbjct: 260 VDEYQDTNRLQASILLALKPDGRGLTVVGDDAQSIYSFRGATVRNILDFPAHFDPPAKQV 319

Query: 278 RLEQNYRSTKTILEASNTLIANNSERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKI 337
            LE+NYRS+  IL ASN +I   SER  K LWTD    +   + +  +E D+AR++V ++
Sbjct: 320 TLERNYRSSAPILAASNAVIELASERYTKNLWTDKASAQRPRLVTVADEADQARYIVEQV 379

Query: 338 KGWQEQGGTLTDCAILYRNNAQSRVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRL 397
              +EQG  L   A+L+R    S  LE  L + ++ +  +GG++F +   +KD L+ LR 
Sbjct: 380 LEAREQGMKLKSQAVLFRAAHHSAALEIELTRRNIPFVKFGGLKFLDSVHVKDVLAVLRW 439

Query: 398 INNRNDDTAFERVINTPPRGLGDKTLETI--RFAARDRGCTLWDASVGLLNDQVLTGRAA 455
             N  D  A  RV+   P G+G  T   +     A        D + G L       RA 
Sbjct: 440 AENPRDRVAGFRVVQLLP-GVGPATAARVLDEVVACAGSGNPADTAGGALAAFTAPARAQ 498

Query: 456 SALSRFVELINALEEEGIDMPLHVLTDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTA 515
                FV+L++++       P               E + +   E +  R  ++ ++ + 
Sbjct: 499 EDWHPFVKLMSSIYGRQTPWPAEF-----EMVRRWYEPHLERNHEDAAIRHADVSQMESI 553

Query: 516 TRQFEKPEEAQEMTMLTAFLTHAALEAGEGQADE------HDDAVQLMTLHSAKGLEFPL 569
              +   E          FLT   L+  +  +DE       +D + L T+HSAKG E+  
Sbjct: 554 AGTYASRER---------FLTELTLDPPDATSDESGVPLIDEDYLILSTIHSAKGQEWRN 604

Query: 570 VFMVGVEEGMFPSQMSAEEAGRLEEERRLCYVGMTRAMQKLYITYAEMRRLYGQDKYHKP 629
           VF++   +G  PS +       ++EERRL YV MTRA + L+I   +  R Y  ++ H  
Sbjct: 605 VFVLNGVDGCIPSDLGTGSEEEIDEERRLLYVAMTRAKEDLHIVVPQ--RFYVHNQTHMG 662

Query: 630 SRFI 633
            R +
Sbjct: 663 DRHV 666