Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 722 a.a., DNA-dependent helicase II (RefSeq) from Shewanella sp. ANA-3

 Score =  973 bits (2514), Expect = 0.0
 Identities = 481/721 (66%), Positives = 582/721 (80%), Gaps = 2/721 (0%)

Query: 2   IDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAV 61
           +D S LLDGLNDKQREAVAAP  ++L+LAGAGSGKTRVL HRIAWLM VE+ SP+S++AV
Sbjct: 1   MDVSSLLDGLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV 60

Query: 62  TFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQ 121
           TFTNKAAAEMR R+E++       MW GTFHG+ HR+LR H+ DA L + FQI+DSDDQ 
Sbjct: 61  TFTNKAAAEMRERVEKVAGTNMGRMWIGTFHGLAHRLLRTHFQDAGLPQSFQILDSDDQV 120

Query: 122 RLLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFD-PVTQTYLKLYTAYQEA 180
           RLLKR++K+ NLD+KQ+P RQ   +IN +KD+GLRP HI+A   P+ Q  LK+Y  YQE+
Sbjct: 121 RLLKRILKSLNLDEKQYPPRQAQAYINGKKDQGLRPKHIDAGGFPIEQNLLKIYQVYQES 180

Query: 181 CDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQ 240
           CDRAGLVDFAEILLRA EL     H+  HYQ RFKHILVDEFQDTNAIQYAW+R++AG  
Sbjct: 181 CDRAGLVDFAEILLRAHELWLNKPHLLAHYQERFKHILVDEFQDTNAIQYAWIRVLAGQT 240

Query: 241 SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN 300
           +NVMIVGDDDQSIYGWRGA+VEN+ +F R+FP+  TIRLEQNYRS   IL+ASN LIANN
Sbjct: 241 ANVMIVGDDDQSIYGWRGAQVENLHRFLRDFPTATTIRLEQNYRSKGNILKASNALIANN 300

Query: 301 SERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS 360
            ER+GK+LWTD   GEPIS+Y A+NE+DEARF+V +I  W E+GG L+DCAILYR+NAQS
Sbjct: 301 PERLGKELWTDEADGEPISLYCAFNEMDEARFIVGRINDWYEKGGNLSDCAILYRSNAQS 360

Query: 361 RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGD 420
           RVLEEALL   LAYRIYGG+RFFERQEIKDA+ Y+RLI+N+NDD AFERV+NTPPRG+GD
Sbjct: 361 RVLEEALLHKGLAYRIYGGLRFFERQEIKDAMGYMRLISNKNDDAAFERVVNTPPRGIGD 420

Query: 421 KTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVL 480
           +TL+ +R  AR +  TLW A + LL+++VL GRAASA+  F++LI  L+EE  DM L+ +
Sbjct: 421 RTLDILRSTARQQELTLWQACLRLLDEKVLAGRAASAVRGFMDLIVTLQEETQDMALYRM 480

Query: 481 TDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAAL 540
           TD  ++ SGL  MY+ EKGEK+ ARIENLEELVTA R FE PEE ++M  L AFL+HAAL
Sbjct: 481 TDTVIQASGLKAMYEAEKGEKAHARIENLEELVTAARTFEMPEELEDMGELNAFLSHAAL 540

Query: 541 EAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY 600
           EAGEGQAD   DAVQLMTLHSAKGLEF +VFM GVEEG+FPS+M+ EE  RL+EERRLCY
Sbjct: 541 EAGEGQADAFTDAVQLMTLHSAKGLEFTMVFMAGVEEGIFPSKMALEEGDRLDEERRLCY 600

Query: 601 VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGRFS 660
           VGMTRAM+KLYITYAE RR+YG++ Y +PSRFI+E+P   +DE+R+KAQVS P +  RFS
Sbjct: 601 VGMTRAMEKLYITYAESRRIYGREDYARPSRFIKEIPPQYVDEIRLKAQVSTPMANNRFS 660

Query: 661 QTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL 720
                 + N+TGF++G RV HPKFG+G + NFEGSG Q+RVQV F+  G KWLV AYARL
Sbjct: 661 AQKSAVA-NDTGFSVGQRVHHPKFGDGKVTNFEGSGAQARVQVNFSDFGSKWLVVAYARL 719

Query: 721 E 721
           E
Sbjct: 720 E 720