Pairwise Alignments

Query, 680 a.a., oligopeptidase A from Vibrio cholerae E7946 ATCC 55056

Subject, 726 a.a., peptidyl-dipeptidase Dcp (RefSeq) from Shewanella loihica PV-4

 Score =  428 bits (1100), Expect = e-124
 Identities = 238/679 (35%), Positives = 383/679 (56%), Gaps = 10/679 (1%)

Query: 4   PLLTFTDLPPFSAIKPEHVKPAVEQAIADCRHTIDKVLAENPQPSWESVIAPIEEVDDRL 63
           P  TF  +P F  IKPEH  PA +  IA  +  I  ++     P++ + I  +E   D  
Sbjct: 55  PYDTFLGMPDFDKIKPEHYLPAFKAGIAQHKAEIQAIIDNPAAPTFANTIEAMEFAGDLT 114

Query: 64  SRIWSPVSHMNSVVNSDELREAYESCLPLLSEYSTWVGQHKGLFEAYKTIKESAEFAKLD 123
           +++ S   ++ S   +++L+   +   P+LS     +  +  LF+  K + +  +   L+
Sbjct: 115 TKVASVFYNLTSADTNEQLQAISKEVSPMLSAAGDDILLNDQLFKRVKAVYDQRDSLALN 174

Query: 124 RAQQKNISDSLRDFELSGIGLPLQEQKRYGEISKRMSELGSKFSNNVLDATMGWTKQITD 183
            AQQK + D+ + F   G  L   ++ +   +++++ +L  +F +N+L  T  +   I +
Sbjct: 175 TAQQKLLEDTYKSFTRGGANLSDADKVKLRALNEKIGKLSLEFGDNLLAETNAFELVIDN 234

Query: 184 VNLLAGMPESALAAAQAAAEAKGLEG-YLLTLDIPSYLPVMTYCDNQALRKEVYEAYVTR 242
              L G+P+  +  A   AE KG  G ++ T   PS  P +TY DN+ LR+++Y+ YV  
Sbjct: 235 AADLKGLPQDVINTAAQTAEKKGHPGKWVFTTQRPSITPFLTYADNRELREKIYKGYV-- 292

Query: 243 ASDRGPNAGKWDNSEIIAEQLKLRHEIARMLGFSTYSEKSLATKMAQTTDQVLGFLNDLA 302
             +RG N    DN +I+A+   LR E A+++G+ +++   L  + A+T + V G L+ + 
Sbjct: 293 --ERGNNNNAHDNKKILAQMAALRAERAQLMGYKSHAHFVLEERTAKTPENVYGLLDKVW 350

Query: 303 NKAKPQGEREVEELRQFAESEFGVKQLELWDIAYYSEKQKQHLFEISDEELRPYFPEQKV 362
             A  Q + EV  +++  ++E G  +L  WD  YY++K +   +  +++E RPYF  +  
Sbjct: 351 PAALGQAKAEVAVMQELIDAEGGNFKLAAWDWWYYADKIRVAKYSFNEQETRPYFSLENT 410

Query: 363 VNGLFEVLSRLFGMQVKERQGVDVWHESVRFFDIFDAQGTLRGSFYLDLYAREHKRGGAW 422
           + G+F   +RL+G+ VKER  +  +++ VR ++++D  G+L   F  D Y R+ KRGGAW
Sbjct: 411 LKGVFYTANRLYGITVKERTDLPKYNDEVRTWEVYDKDGSLMAIFLGDYYVRDSKRGGAW 470

Query: 423 MDECRVRRTTDSGALQTPVAYLTCNFNRPVGDKPALFTHDEVTTLFHEFGHGIHHMLTQV 482
            +  R ++    G    P+     N+ RPVGD+PAL T DE +TLFHEFGH +H ML+ V
Sbjct: 471 ANAYR-KQYRMHGVESKPIIVNVLNYPRPVGDEPALLTFDEASTLFHEFGHALHAMLSDV 529

Query: 483 EVGAVSGINGVPWDAVELPSQFLENWCWQEEALAFISGHYQTGEPLPKAMLDKMLAAKNF 542
           E  + +G   VP D VE PSQ +ENW  Q E LA  + HY+TGE +P+++++K+ AA  F
Sbjct: 530 EYRSQAG-TSVPRDYVEFPSQVMENWMTQPEVLAQFAKHYKTGEVIPQSLVEKIQAASKF 588

Query: 543 QSAMFILRQLEFGLFDFTLHTTYDPEVGPK-VLETLAEVKKKVAVLPGLEWNRFSHSFSH 601
                 +  +     D   HT  D E  PK   +  A+   K+ ++  +     S  FSH
Sbjct: 589 NQGFATVEYMAATKLDLDWHTLSDFE--PKDAAKFEADSLSKMGLIEEIAPRYRSTYFSH 646

Query: 602 IFAGGYSAGYYSYLWAEVLSADAFSRFEEEGIFNRETGQSFLNNILEMGGSEEPMELFKR 661
           IF+GGYSAGYYSYLW+++L ADAF  F+E GIF++ T  +F NN+L  GGSE+PM L+K+
Sbjct: 647 IFSGGYSAGYYSYLWSDILGADAFEAFKENGIFDKATADAFRNNVLSQGGSEDPMLLYKQ 706

Query: 662 FRGREPQIDALLRHAGIAA 680
           FRG+E  I+ LLR  G+ A
Sbjct: 707 FRGKEAGIEPLLRSRGLLA 725