Pairwise Alignments

Query, 680 a.a., oligopeptidase A from Vibrio cholerae E7946 ATCC 55056

Subject, 679 a.a., oligopeptidase A (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  941 bits (2432), Expect = 0.0
 Identities = 464/681 (68%), Positives = 558/681 (81%), Gaps = 3/681 (0%)

Query: 1   MSNPLLTFTDLPPFSAIKPEHVKPAVEQAIADCRHTIDKVLAENPQP-SWESVIAPIEEV 59
           MSNPLL    LP FS IKPEH++ AVE AIA CR  ID+VL +NP P +WE++IAP+E+V
Sbjct: 1   MSNPLLNGASLPLFSQIKPEHIQVAVEHAIAQCRAKIDEVL-QNPGPYTWENLIAPLEQV 59

Query: 60  DDRLSRIWSPVSHMNSVVNSDELREAYESCLPLLSEYSTWVGQHKGLFEAYKTIKESAEF 119
           DD LS+IWSPVSHMNSV ++DE R A+++CLPLLSEY T+VGQH+GL+EAYK+++ S  F
Sbjct: 60  DDELSQIWSPVSHMNSVTSTDEWRAAHDACLPLLSEYGTYVGQHQGLYEAYKSLRASEVF 119

Query: 120 AKLDRAQQKNISDSLRDFELSGIGLPLQEQKRYGEISKRMSELGSKFSNNVLDATMGWTK 179
            +L +AQQ  I  SLRDFELSGIGL   ++ RYGEI KR+SEL S FSN +LDAT  WTK
Sbjct: 120 EQLSQAQQMVIEHSLRDFELSGIGLDDAQKLRYGEIVKRLSELTSGFSNQLLDATQAWTK 179

Query: 180 QITDVNLLAGMPESALAAAQAAAEAKGLEGYLLTLDIPSYLPVMTYCDNQALRKEVYEAY 239
            ITD   LAG+P+SA AAA+A AEA+ LEG+L TLD PSYLPVMTY +N+ LR+E Y A+
Sbjct: 180 LITDEAELAGLPDSAKAAAKAMAEARELEGWLFTLDFPSYLPVMTYSENRELREECYRAF 239

Query: 240 VTRASDRGPNAGKWDNSEIIAEQLKLRHEIARMLGFSTYSEKSLATKMAQTTDQVLGFLN 299
           VTRASD+GPNAG++DN  ++ E L LRHE+A++LGF +++EKSLATKMA+T  QV+ FLN
Sbjct: 240 VTRASDQGPNAGEFDNGPLMDEILALRHELAQLLGFDSFAEKSLATKMAETPAQVMAFLN 299

Query: 300 DLANKAKPQGEREVEELRQFAESEFGVKQLELWDIAYYSEKQKQHLFEISDEELRPYFPE 359
           +LA ++K Q + E+ EL+ FA+ ++GV ++  WD+++Y+EK +QH +EIS E LRPYFPE
Sbjct: 300 ELALRSKDQAKAELAELKAFAQEQYGVSEMASWDLSFYAEKLQQHKYEISQELLRPYFPE 359

Query: 360 QKVVNGLFEVLSRLFGMQVKERQGVDVWHESVRFFDIFDAQGTLRGSFYLDLYAREHKRG 419
            KV++GLF  +SRLFG+++ E+   D WH+ VRFFDIFD  G  RGSFYLDLYAR  KRG
Sbjct: 360 DKVLSGLFYTVSRLFGLKIIEQTEFDRWHKDVRFFDIFDETGEHRGSFYLDLYARTGKRG 419

Query: 420 GAWMDECRVRRTTDSGALQTPVAYLTCNFNRPVGDKPALFTHDEVTTLFHEFGHGIHHML 479
           GAWMD+CRVRR T +G LQ PVAYLTCNFN PV  KPALFTHDEVTTLFHEFGHGIHHML
Sbjct: 420 GAWMDDCRVRRQTANG-LQKPVAYLTCNFNGPVDGKPALFTHDEVTTLFHEFGHGIHHML 478

Query: 480 TQVEVGAVSGINGVPWDAVELPSQFLENWCWQEEALAFISGHYQTGEPLPKAMLDKMLAA 539
           T+++V  VSGINGVPWDAVELPSQF+ENWCWQEEALA ISGHY+TGEPLPKAMLDKMLAA
Sbjct: 479 TKIDVAGVSGINGVPWDAVELPSQFMENWCWQEEALAEISGHYETGEPLPKAMLDKMLAA 538

Query: 540 KNFQSAMFILRQLEFGLFDFTLHTTYDPEVGPKVLETLAEVKKKVAVLPGLEWNRFSHSF 599
           KNFQS M +LRQLEF LFDF LH  YDP  G  + ETL EV+++VAVL    +NRF H F
Sbjct: 539 KNFQSGMMMLRQLEFSLFDFRLHHEYDPAKGACIQETLDEVRRQVAVLIPPAFNRFQHGF 598

Query: 600 SHIFAGGYSAGYYSYLWAEVLSADAFSRFEEEGIFNRETGQSFLNNILEMGGSEEPMELF 659
           +HIFAGGY+AGYYSY WAEVLSADAFSRFEEEGIFN ETG+ FL+NILEMGGS EPM+LF
Sbjct: 599 AHIFAGGYAAGYYSYKWAEVLSADAFSRFEEEGIFNPETGRRFLHNILEMGGSAEPMDLF 658

Query: 660 KRFRGREPQIDALLRHAGIAA 680
           K+F GREP IDALLRH+GIAA
Sbjct: 659 KQFMGREPSIDALLRHSGIAA 679