Pairwise Alignments

Query, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., Protein of unknown function DUF519 (NCBI) from Rhodospirillum rubrum S1H

 Score =  213 bits (543), Expect = 3e-60
 Identities = 115/280 (41%), Positives = 164/280 (58%), Gaps = 2/280 (0%)

Query: 2   LSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGEY 61
           ++Y H++HAGN ADVLKH V +L LN L +K KPF   DTH+G GR+DL    +EKTGE 
Sbjct: 1   MNYDHAYHAGNFADVLKHTVLALCLNHLTRKPKPFFVLDTHAGQGRFDLAGPEAEKTGEA 60

Query: 62  KQGIARIWQQDNIPAELDSYLDAIRQLNQGE-TLRYYPGSPRVARAHLREQDRMVLTELH 120
           + GI R+ +  ++P  L  YL  +R+L   E TLR YPGSP +ARA +R  DR+V  ELH
Sbjct: 61  RGGIFRLLEAPDLPEALAPYLAQVRRLGMVEGTLRRYPGSPLLARALMRPGDRLVAAELH 120

Query: 121 PSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVVRAI 180
           P     L +    DR   I   DG+  LKA +PP ERRGLVLIDPP+E   E+  + RA+
Sbjct: 121 PVHGESLARLMRGDRDTRIEARDGYEALKALVPPPERRGLVLIDPPFERTDEFTALERAV 180

Query: 181 AQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGM 240
                RW  G   IWYP+ +   +    + L+       L  EL V P      +  +G+
Sbjct: 181 TALVGRWRAGTCVIWYPIKDEPAVRRFHQTLKDRLDVPTLIAELWVRPRFPPLKLNGTGL 240

Query: 241 IVINPPWTLESQMQTILPFLKQAIA-PATGHYKVEWVVPE 279
           +++NPP+ L + +  +LP+L   +A P  G ++++W++ E
Sbjct: 241 VILNPPYPLHTALPEVLPWLAGVLAEPGGGDWRLDWLIEE 280