Pairwise Alignments

Query, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Protein involved in catabolism of external DNA from Phaeobacter inhibens DSM 17395

 Score =  168 bits (425), Expect = 1e-46
 Identities = 92/259 (35%), Positives = 142/259 (54%), Gaps = 4/259 (1%)

Query: 1   MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGE 60
           MLSY+H +HAGN ADV KH + + +L+ L +K+KP  Y +TH+G G Y L    + KTGE
Sbjct: 1   MLSYQHIYHAGNLADVQKHALLARMLDYLTRKDKPLSYIETHAGRGLYQLDAAEAVKTGE 60

Query: 61  YKQGIARIWQQDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELH 120
              GI R+     + AE     +AI +    +  + YPGSP +A   LRE D +   ELH
Sbjct: 61  AAAGINRLLDGSMLDAE-HPLAEAITRTRSADGEKAYPGSPLIAAHLLREADSLNFAELH 119

Query: 121 PSDYPLLEQEFHRD---RQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVV 177
           P +   L Q        R+V ++++DGF   ++  PP  RRGL+LIDP YE+ ++Y  + 
Sbjct: 120 PQENAALRQALWPHGLGRRVHVHQQDGFELAQSLAPPTPRRGLMLIDPSYEVKRDYAQIP 179

Query: 178 RAIAQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTA 237
             IA+ +++W  G+ A+WYP++       ML  L+   +   L+ E+   P      M  
Sbjct: 180 GHIAKLHRKWNVGVIALWYPILTDGTHKPMLTALEAQNLPGALRHEVRFPPAREGHRMVG 239

Query: 238 SGMIVINPPWTLESQMQTI 256
           SGM ++N P+  E + + +
Sbjct: 240 SGMFIVNAPFGTEDEARRL 258