Pairwise Alignments

Query, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., competence protein ComJ from Cupriavidus basilensis FW507-4G11

 Score =  229 bits (584), Expect = 5e-65
 Identities = 118/266 (44%), Positives = 167/266 (62%), Gaps = 6/266 (2%)

Query: 1   MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGE 60
           MLSYRH+FHAGNHADVLKH +   +L  L QK+KPF Y DTH+G G Y L H +++K GE
Sbjct: 1   MLSYRHAFHAGNHADVLKHAIVVQLLEQLSQKDKPFWYIDTHAGAGLYALDHAYAQKKGE 60

Query: 61  YKQGIARIWQ----QDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVL 116
           ++ GIAR+WQ    +  +P  ++ YL+ +R LN    L++YPGSP +A   LR+ DR+ L
Sbjct: 61  FETGIARLWQAAAAKRPMPTLVEDYLEQVRTLNPDGNLKHYPGSPWLAWQMLRDADRLRL 120

Query: 117 TELHPSDYPLLEQEFH-RDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRD 175
            E+H ++  +L   F    R+V +Y  DGF  + A LPP  RR LVLIDP YE  ++Y  
Sbjct: 121 FEMHSTEIQVLRDNFRGAGRRVMLYDGDGFTGINAILPPPPRRALVLIDPSYEDKQDYGR 180

Query: 176 VVRAIAQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVA-PDTNERG 234
           VVR++    +R+ATG+YAIWYP V R +   +   L+ L ++  L + L V  P     G
Sbjct: 181 VVRSLQDCLQRFATGMYAIWYPEVQRRESVQLPVQLKKLPLKSWLHVTLRVKHPVAGGLG 240

Query: 235 MTASGMIVINPPWTLESQMQTILPFL 260
           +  SGM ++NPPW L+  ++  +P L
Sbjct: 241 LHGSGMFIVNPPWRLKETLEAAMPAL 266