Pairwise Alignments

Query, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., competence protein ComJ from Burkholderia phytofirmans PsJN

 Score =  227 bits (578), Expect = 3e-64
 Identities = 117/278 (42%), Positives = 171/278 (61%), Gaps = 3/278 (1%)

Query: 1   MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGE 60
           MLSYRH+FHAGNHADVLKH V   +L  L QK+K + Y DTH+G G Y L   ++ KTGE
Sbjct: 1   MLSYRHAFHAGNHADVLKHAVVLQLLRYLGQKDKSYWYIDTHAGAGVYSLKEGYATKTGE 60

Query: 61  YKQGIARIWQQDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELH 120
           ++ GI ++W ++++P     Y+D +  LN    LR+YPGSP +A   +REQDRM L ELH
Sbjct: 61  FQSGIGKLWGRNDLPPMFADYVDEVSALNPDGQLRFYPGSPYIAWRQMREQDRMRLFELH 120

Query: 121 PSDYPLLEQEFH-RDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVVRA 179
            ++  +L   F    R+  +Y  DGF  + A LPP  RR LVL+DP YE  ++Y   +R 
Sbjct: 121 TTEIDVLRHNFRDAGRRAMLYAGDGFDGILALLPPAPRRALVLLDPSYEDKRDYIRTLRC 180

Query: 180 IAQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVA-PDTNERGMTAS 238
           + +S KR+ TG YA+WYP V R +     + L+ L+ +  L + L V+ P  +  G+  S
Sbjct: 181 VEESLKRFPTGTYAVWYPQVRRPESQRFPDQLKKLQDKNWLHVSLTVSNPPEDGFGLFGS 240

Query: 239 GMIVINPPWTLESQMQTILPFLKQAIA-PATGHYKVEW 275
           GM ++NPP+TL   ++  +P+L +A+       +KVE+
Sbjct: 241 GMFILNPPYTLAKTLKDQMPWLVKALGEDKAAQFKVEY 278