Pairwise Alignments

Query, 532 a.a., deoxycytidylate deaminase from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., cytidine deaminase from Burkholderia phytofirmans PsJN

 Score =  289 bits (740), Expect = 2e-82
 Identities = 184/473 (38%), Positives = 273/473 (57%), Gaps = 32/473 (6%)

Query: 31  QKRILERRSRELVIGLCGAIGSGVKALKESLVSSLE--TYGYEVVDI-RISKIISEKTQT 87
           QK I   R+ E+VI LCG +G+ +  + E+  + LE   Y Y+ V+I R+S+ I   T  
Sbjct: 23  QKTIDNTRTPEVVIALCGPMGTPLHEVAETFQTLLEGTDYRYKKVNIIRLSQEIRRLTGM 82

Query: 88  SLDGLSAFKRYNRLQDLGNSLRETHKSSILAACAIEEIALERTLICQNEIDETS-----E 142
             D  S       L D GN LR  H +++LA  AI++IALER  +  NE D+       E
Sbjct: 83  RDDVTSI----RELIDAGNQLRADHDNAVLARVAIQQIALERAEL--NETDDAKQTDMFE 136

Query: 143 ENDNEPSLIKTTK--KIAYIIDQLKHPDEIKFLRSVYPRNFYLIGLIRTEGERRLNLEEE 200
           +    P  ++ TK  +  +IID +KH DE++ LRSVY    +++G+      R   L + 
Sbjct: 137 DEGMAPDAVRPTKSERCCHIIDSIKHIDELRLLRSVYGDMLHVVGVYTPIELRLEKLAKR 196

Query: 201 KISPSEIDTLMRRDR-KDVSHGQQVEKSLFNADYFIHNIHNQKQMLDKSVERFIKLVHGI 259
            +   ++  L+ RD  ++++HGQ+V+ +   +D+F+         L   V+RF+ L+ G 
Sbjct: 197 ALKGEDVYKLIDRDSGEELAHGQRVQDTFPLSDFFLRADKATDSQLRARVKRFLDLMLGT 256

Query: 260 NGISPTIDEIGMHAAYSAALRSACLSRQVGAAILDNQGNIISTGCNDVPSFGGGLYNSNS 319
              +PT+ E  M+AA+SAA  SACLSRQVGAA+ + +GN+IS G NDVP   GGLY +  
Sbjct: 257 RIATPTVQERAMYAAFSAARNSACLSRQVGAALTNERGNVISVGWNDVPKPFGGLYETQD 316

Query: 320 LAD-----FRC--VHTGRCSNDKHKDILKEEITDILKKSITNTLELKEIVNQ----ITSE 368
             D      RC  +  GRC ND  KD++ E +   +KK + N +   E  N     +  +
Sbjct: 317 AGDSFDTDHRCWNLDGGRCFNDSEKDVIAETV---VKKMVDNGIITPEKRNAAYGLMRHD 373

Query: 369 TKIKTLIEYSRAVHAEMDSLIALARNNKETSVDKTLYVTTYPCHNCARHIVAAGIKKVVY 428
           +++K+LIE+SRAVHAEM +L++    +        L+VTTYPCH+CARHIVAAGI +V +
Sbjct: 374 SQLKSLIEFSRAVHAEMHALLSAGATHGNEIRGGKLFVTTYPCHSCARHIVAAGISEVYF 433

Query: 429 VEPYEKSLAMKLHDDSISDNADAKNKVCFLPFEGVSSRRYEVFFQMH-GDRKD 480
           +EPY KSLA KLH D+I+D     +KV  +PF+GV+  R+  FF  H G RK+
Sbjct: 434 LEPYRKSLATKLHSDAITDRETDTDKVRIMPFDGVAPSRFLKFFSSHEGGRKN 486