Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  194 bits (493), Expect = 2e-54
 Identities = 106/276 (38%), Positives = 171/276 (61%), Gaps = 12/276 (4%)

Query: 33  FAVFVLFVIVAISAPLIAP-TNPYDLSSIDIMDAELPPSWMEGGNEHFLLGTDEQGRDIF 91
           FA+  + +++  +  L AP   PYD  + D+M    PP WM  G   ++LGTD+ GRD  
Sbjct: 32  FAIGAVLLLIIFAGALFAPWLAPYDPYAQDVMLRMKPPVWMANGTWEYVLGTDKLGRDYL 91

Query: 92  STILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQLSFSTMMVAI 151
           S +LYG+R+SL IG  A  +   +G V+GL AGY+GG++D+F+      +L+   +MVA+
Sbjct: 92  SRLLYGARISLFIGIAAALISGFIGTVMGLLAGYYGGKVDAFISYLITTRLAMPVVMVAL 151

Query: 152 IVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKEYVEAARVMGF 211
             +++     GG      ++ +++V++G   W ++A  VRASV   +  EYV +A+ +G 
Sbjct: 152 ASASL----MGG------SLKVVIVLLGCLLWDRFAVVVRASVQQIRDAEYVASAQALGC 201

Query: 212 KAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLGSLISIGFTY 271
              RI+   ILPN +  ++V++T+++A+AI+ E+ALSFLG+G+    PS G +I+ G  Y
Sbjct: 202 STLRILVSEILPNLVGALIVVATLEMAHAILLESALSFLGVGVQPPTPSWGLMIAEGKPY 261

Query: 272 IFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNP 307
           +F    W+ A PG+ L++LVL INL+GD LRD+  P
Sbjct: 262 MFFSP-WVIAIPGVALMILVLGINLVGDGLRDLILP 296