Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., peptide transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  198 bits (504), Expect = 1e-55
 Identities = 110/286 (38%), Positives = 171/286 (59%), Gaps = 19/286 (6%)

Query: 24  LRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYD--LSSIDIMDAELPPSWMEGGNEHFLL 81
           L   +A+   AV ++ V  A  AP + P +P++     + I  A LPP      N  F L
Sbjct: 24  LHRPLALIGLAVIIVVVGAAALAPWVVPYDPHEQFFEGLTIEGAPLPP------NSQFWL 77

Query: 82  GTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQ 141
           GTD  GRD+ S ++YG+R SL IG +A G+ + +G ++G++AGYF G +D+ LMRF D+ 
Sbjct: 78  GTDLVGRDLLSRLIYGARTSLVIGVVANGIAVVIGSLVGIAAGYFRGWVDTVLMRFTDLM 137

Query: 142 LSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKE 201
           ++F  +++AI+++AIF  S          + ++ ++I +  W Q AR V     +  +++
Sbjct: 138 MAFPALLLAIVLAAIFTPS----------LWIVAMVIAMVNWVQIARVVYTETRSIAERD 187

Query: 202 YVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSL 261
           +V A R MG  A RI+FRHILP+ LS I+V +T+ +A  ++ EA LSFLG+G+    PS 
Sbjct: 188 FVTAERAMGAGAGRILFRHILPHLLSTIIVWATLGIATTVLLEATLSFLGIGVQPPIPSW 247

Query: 262 GSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNP 307
           G++I    TY F+ A W+   PG  ++ L L  NL+GD LRDV +P
Sbjct: 248 GNIIFENQTY-FTSAPWLVFIPGAAILALALAFNLVGDALRDVLDP 292