Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  192 bits (488), Expect = 9e-54
 Identities = 114/289 (39%), Positives = 165/289 (57%), Gaps = 20/289 (6%)

Query: 20  LYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHF 79
           L  FL +  A+   A   L + VA+ AP++ P +P  +           P    G +  F
Sbjct: 59  LKVFLANPNALFGTAFLALVIAVALLAPVLYPGDPLSMVG--------KPFLWPGQHPAF 110

Query: 80  LLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFAD 139
            LGTD  GRD+ + IL+GSR+SL +G +A  L LT G+V+G  AGYF G ID  L+R  +
Sbjct: 111 PLGTDSLGRDVLAGILHGSRISLFVGLMATALGLTFGVVVGAIAGYFSGWIDDLLVRLIE 170

Query: 140 IQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKK 199
           I  +  + ++ +++ AI + S             + + I V  WP  AR  RA   A ++
Sbjct: 171 IFQTLPSFVLLVVLVAIVQPS----------ATTVTLAIAVISWPTVARLTRAEFRAIRE 220

Query: 200 KEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQP 259
           K++V AAR +GF   RI+ R ILPN L PI+V S+V VA AI+ E+ALSF+GLG P +  
Sbjct: 221 KDFVMAARSLGFGHGRIIVREILPNALPPIIVTSSVMVATAILMESALSFMGLGDP-NVV 279

Query: 260 SLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPK 308
           S GS+I  G   + + AW++TA PG+ +V  VL +NL+GD L D  NP+
Sbjct: 280 SWGSMIGTGRELVRT-AWYLTALPGLAIVFTVLALNLIGDGLNDALNPR 327