Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  226 bits (575), Expect = 7e-64
 Identities = 117/281 (41%), Positives = 176/281 (62%), Gaps = 10/281 (3%)

Query: 28  VAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHFLLGTDEQG 87
           V  +S  +   +++VAI+APLIAP NPYD   I   +A  PP     G   +LLGTD  G
Sbjct: 17  VLTASKLLLASYILVAIAAPLIAPQNPYDPLQIYGWEASSPPGTRGSGGYLYLLGTDGLG 76

Query: 88  RDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQLSFSTM 147
           RDI STILYG R+SL +  ++  L   +G+  G+SA YFG  +D  +MR  D+QLS  T+
Sbjct: 77  RDIVSTILYGLRISLVVSIVSSALAALIGLTAGVSAAYFGKWVDIAIMRLVDLQLSLPTI 136

Query: 148 MVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKEYVEAAR 207
           ++A+I  AI     G        +  +++ + +A+W  YAR  R   L+E  K Y++AAR
Sbjct: 137 LIALI--AIVTLGPG--------IDRIILALIIAQWATYARIARGVALSEANKPYMDAAR 186

Query: 208 VMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLGSLISI 267
           +M     RI+FRH+LPN ++P + +  ++V +A+  EA LSFLGLG+P+D+PSLGS ++ 
Sbjct: 187 LMRLPTSRIIFRHLLPNSIAPAVTLIPIEVGHAVALEATLSFLGLGVPIDKPSLGSAVAN 246

Query: 268 GFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPK 308
           GF Y+ +G +WI+ FPG+ L  L+  INL+G+ +R   +P+
Sbjct: 247 GFQYLLTGQYWISLFPGLALFGLIASINLVGEDVRRSLDPR 287