Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  182 bits (463), Expect = 6e-51
 Identities = 104/287 (36%), Positives = 164/287 (57%), Gaps = 21/287 (7%)

Query: 23  FLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHFLLG 82
           FLR    +    + +  VI+AI AP + P +P+++ +        PP+     +E   LG
Sbjct: 7   FLRHPTGVIGLIILIAVVILAICAPTLFPDDPWEMVAAPFQ----PPA-----SEGLPLG 57

Query: 83  TDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQL 142
           +D  GR++ + I YG+R+SLTIG  +    L +G+ IG  AGYFGGR+D F+MR  ++  
Sbjct: 58  SDMLGRNVAAGIAYGARVSLTIGVASTLAALCIGVTIGAIAGYFGGRVDDFMMRLTELFQ 117

Query: 143 SFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKEY 202
           +    ++AI++ A    +          +  +++ IG   WP  AR  RA  +  + +E+
Sbjct: 118 TIPGFILAILLVATIGPT----------LTNVIISIGAVSWPPLARLTRAEFMRLRGREF 167

Query: 203 VEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLG 262
           V+AA   G     +  RHILPN +SPI+V  ++ +A AI+ E+ALSF+GLG P +  S G
Sbjct: 168 VQAAVCQGQAPLIVALRHILPNAISPIIVTGSLTIATAILIESALSFMGLGDP-NLMSWG 226

Query: 263 SLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309
            +I    T +   AWW++ FPGI ++L VL INL+G+ L D+ NP+I
Sbjct: 227 LMIGASRT-VIRQAWWMSVFPGIAILLTVLAINLVGEGLNDMLNPRI 272