Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  167 bits (423), Expect = 3e-46
 Identities = 100/290 (34%), Positives = 170/290 (58%), Gaps = 21/290 (7%)

Query: 20  LYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHF 79
           L + L   +   +     L V++AI AP +AP +P  L+         P   ++  +  F
Sbjct: 21  LGFLLSTPIIAVATICLTLVVLMAIFAPWLAPHDPVKLA---------PALRLKPPSAEF 71

Query: 80  LLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFAD 139
           LLGTD  GRD+ S I+YG R+SL IG  +  + + +G+VIGL AG+F   +D+ +MR  D
Sbjct: 72  LLGTDAYGRDLLSRIIYGGRVSLLIGIGSAIVAIAIGLVIGLVAGFFRW-VDAVMMRVMD 130

Query: 140 IQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKK 199
             ++  ++++AI V ++  AS          +  +++ I + E P+ AR VR+ VL  ++
Sbjct: 131 GLMAIPSVLLAIAVVSLSGAS----------LTTVLIAITIPEIPRVARLVRSVVLTARE 180

Query: 200 KEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQP 259
           + YVEAA  +G   P+IM RH++PN ++P++V  T   A+AI++EA LSFLG G+  + P
Sbjct: 181 EPYVEAAISVGSSLPKIMVRHLMPNTVAPLIVQGTYIAASAILTEAILSFLGAGISPETP 240

Query: 260 SLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309
           + G++++ G  Y F     +  +PG++L + +L +NL+GD  RD  +P++
Sbjct: 241 TWGNIMAEGRAY-FQIKPMLIFWPGLLLSIAILSVNLIGDAARDALDPRM 289