Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., dipeptide transport system permease protein DppC from Phaeobacter inhibens DSM 17395

 Score =  423 bits (1087), Expect = e-123
 Identities = 211/312 (67%), Positives = 253/312 (81%)

Query: 1   MSAVSIAPSRWERFKQSDFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSI 60
           +S     PSR+ R   S+  Y F R+ VAM SFAVF++  I +I AP++AP +PYD + I
Sbjct: 4   LSTNQSTPSRFSRLWNSNMGYSFRRNPVAMVSFAVFLVITIASILAPVLAPFDPYDPAQI 63

Query: 61  DIMDAELPPSWMEGGNEHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIG 120
           DIM++E PP W++G +  F+ GTD+QGRD++STILYG+RLSL IG  AV LQ  LGI IG
Sbjct: 64  DIMNSEYPPVWIDGSDSQFVFGTDDQGRDLWSTILYGTRLSLLIGLCAVALQAFLGISIG 123

Query: 121 LSAGYFGGRIDSFLMRFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGV 180
           L AGY GGR+DS LMRFADIQLSFST+MVAII  A+ +A FG E F+QYA+  L+ +IGV
Sbjct: 124 LVAGYVGGRLDSLLMRFADIQLSFSTLMVAIIFLAVTQAMFGSETFNQYAIYFLIAVIGV 183

Query: 181 AEWPQYARTVRASVLAEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANA 240
           AEWPQYARTVRA+VLAEKKKEY+++ARV+GF   RIM RHILPN LSPI VISTVQVANA
Sbjct: 184 AEWPQYARTVRATVLAEKKKEYIDSARVLGFGPMRIMVRHILPNSLSPIFVISTVQVANA 243

Query: 241 IMSEAALSFLGLGLPVDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDW 300
           I+SEA+LSFLGLG+P  QPSLGSLIS GF YIFSG+WWITA PG+VLV+LVLVINLLGDW
Sbjct: 244 IISEASLSFLGLGMPPSQPSLGSLISSGFDYIFSGSWWITAIPGVVLVVLVLVINLLGDW 303

Query: 301 LRDVFNPKIYKG 312
           +RDV NPK+YKG
Sbjct: 304 MRDVLNPKLYKG 315