Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., dipeptide transport system permease protein DppC from Phaeobacter inhibens DSM 17395

 Score =  176 bits (447), Expect = 5e-49
 Identities = 101/284 (35%), Positives = 156/284 (54%), Gaps = 19/284 (6%)

Query: 25  RDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHFLLGTD 84
           ++ +AM    + +L + +A+ AP+IAP +PY    +  +   L P     G+E  +LGTD
Sbjct: 43  QNHMAMVGLGILILLISIALLAPVIAPHDPY----VQNLANRLQPL----GSEGHILGTD 94

Query: 85  EQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQLSF 144
             GRDI S +++G+R++L I  L   +    G+++G  +GY GG  D  LMR  DI L+F
Sbjct: 95  SLGRDILSRLIHGARITLYIVALVAMIAPIAGLLVGTVSGYVGGWADIILMRITDIFLAF 154

Query: 145 STMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKEYVE 204
             +++A+     F A+ G        +   V+ I +  WP YAR  RA  L  +  +Y+ 
Sbjct: 155 PRLVLALA----FVAALGA------GIENAVLAISLTAWPPYARMARAETLTIRSSDYIS 204

Query: 205 AARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLGSL 264
           A R+ G    RI+ +HI P C+S ++V  T+ +A  I++ A L FLGLG     P  G++
Sbjct: 205 AIRLQGAGPLRIIIKHIWPLCVSSLIVRVTLDMAGIILAAAGLGFLGLGAQPPSPEWGAM 264

Query: 265 ISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPK 308
           IS G  +I    WW+   PG+ +  + L  NLLGD LRDV +PK
Sbjct: 265 ISEGRRFILD-HWWVATMPGLAIFAVSLAFNLLGDGLRDVLDPK 307