Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., ABC-type dipeptide/oligopeptide/nickel transport system, permease component from Dechlorosoma suillum PS

 Score =  242 bits (617), Expect = 1e-68
 Identities = 121/298 (40%), Positives = 181/298 (60%), Gaps = 10/298 (3%)

Query: 15  KQSDFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEG 74
           + S FL  F  +     +  +  L ++ A + P +AP NPYD +++DI+DA LPP     
Sbjct: 41  RSSTFLARFAANPAGKLALLLLALTLLTAFAGPFLAPQNPYDPAALDILDARLPPGSAAA 100

Query: 75  GNEHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFL 134
               +LLG+DEQGRD+ S ++YG RLSL +     GL   LG  +GL+AGYFGGR +  +
Sbjct: 101 AGGTYLLGSDEQGRDLLSAMVYGLRLSLLVAGAGTGLACLLGAALGLTAGYFGGRWERLV 160

Query: 135 MRFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASV 194
           +  AD+QLSF  +++A+ + A+          S   +  + + +  ++W  +AR+ R + 
Sbjct: 161 LALADLQLSFPALLIALALLAL----------SGPGLPKVALALAASQWAYFARSARVAA 210

Query: 195 LAEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGL 254
           L E  K+Y+ AAR+ G    R+++RH+LPNCL P+LVI  +Q+A AI  EA LSFLGLG 
Sbjct: 211 LVESGKDYIAAARLQGLSHARLLWRHLLPNCLPPLLVILPLQLAAAISLEATLSFLGLGA 270

Query: 255 PVDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKIYKG 312
           P  +PSLG LI+ GF Y+ SG +WI+ +PG++L L V  I L  D L  V +P+  +G
Sbjct: 271 PATEPSLGRLIANGFAYLLSGQYWISLYPGLLLTLAVTAITLAADRLAAVLDPRRQEG 328